New model in OGS2.0 | DPOGS212066  |
---|---|
Genomic Position | scaffold4117:- 793-4600 |
See gene structure | |
CDS Length | 972 |
Paired RNAseq reads   | 392 |
Single RNAseq reads   | 1218 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009805 (4e-158) |
Best Drosophila hit   | brahma associated protein 55kD (9e-106) |
Best Human hit | actin-like protein 6A isoform 1 (5e-73) |
Best NR hit (blastp)   | actin [Culex quinquefasciatus] (4e-119) |
Best NR hit (blastx)   | actin [Culex quinquefasciatus] (3e-115) |
GeneOntology terms    | GO:0035060 brahma complex GO:0003713 transcription coactivator activity GO:0045893 positive regulation of transcription, DNA-dependent GO:0007010 cytoskeleton organization GO:0005884 actin filament GO:0005200 structural constituent of cytoskeleton GO:0005515 protein binding GO:0000910 cytokinesis GO:0048813 dendrite morphogenesis GO:0007517 muscle organ development |
InterPro families   | IPR004000 Actin-like |
Orthology group | MCL10737 |
Nucleotide sequence:
ATGCTATATGGTGGTGATGAAATAGGAGCTTTAGTGTTCGATCCCGGGCATCACTCGCTT
AGGGTTGGTTATGCCCAAGAAGATACTCCTAAAGCCGACATCCCTGCAGTTATTGGTGTC
GGCCCAGCAACTCACATCCCTGACGCTGAAGAAAAGGTCCCCGATGGAAATGTCACACAG
AGCGCTACAAAGAAAGACGAGCTCCGGTACTACATAGATGTGACGGAGCTTCACGTGCCC
CGGCCGAACATGGAGGTTCAGACTTATATGAAAGATGGACAGATCGATAACTGGGATCTG
TTTGAGAAAATGTTGGATTACTGTTATTCAAAGGTGATAAGATCACCATCGGAACATCAT
CCGGCTCTCTTCACTGAGGCCGTGTGGACAACCAGGCCGGCTCGGGAGAAGCTCGCTGAG
TTGTTGTTTGAAAAATACCAAGCTCCAGCCTTCTTTTTGGTCAAAAATGCTGTTCTGGCA
GCATTCGCGAACGGAAAGTCAACAGCACTGGTGGTAGACGCTGGTGCAAGCCAAACTTCA
GCAATCCCTGTTATTGATGGATACGCGTTAACAAGTGCCGCAGCCCGCTCACCCCTCGGC
GGCGATCACTTAGCATCCCAAGCTAAACTGCTGCTGGCAAACATGCACATCCACATGCTG
CCCTTATACAGCATACAGAGCAAAGAAGTCATACGTGAGAGAGAGAGAGCGAGATACACA
CCTCGCGTTCTACCAGCAGGTCTAACTTCCAGCTGGCAGCAGTACATGCTAAAACGGCAG
TATGAGGACTTCGTTCACACAGTGGCTCAAGTGTCTGAAATGGTGTACGACGAACGGACA
GCTGCTTCCGTTCCAGGTGTTCATTACGAATTTCCAGGTGGTTATCACCAGGACTTCGGA
CCGGAGAGGTTCAAACTGACGGAATGCCTGTTTGAACAGACTTTGGGAGCGCCACATCTG
GGTATGTGTTGA
Protein sequence:
MLYGGDEIGALVFDPGHHSLRVGYAQEDTPKADIPAVIGVGPATHIPDAEEKVPDGNVTQ
SATKKDELRYYIDVTELHVPRPNMEVQTYMKDGQIDNWDLFEKMLDYCYSKVIRSPSEHH
PALFTEAVWTTRPAREKLAELLFEKYQAPAFFLVKNAVLAAFANGKSTALVVDAGASQTS
AIPVIDGYALTSAAARSPLGGDHLASQAKLLLANMHIHMLPLYSIQSKEVIRERERARYT
PRVLPAGLTSSWQQYMLKRQYEDFVHTVAQVSEMVYDERTAASVPGVHYEFPGGYHQDFG
PERFKLTECLFEQTLGAPHLGMC