| New model in OGS2.0 | DPOGS211301 |
|---|---|
| Genomic Position | scaffold2297:+ 67842-77007 |
| See gene structure | |
| CDS Length | 759 |
| Paired RNAseq reads | 1549 |
| Single RNAseq reads | 4404 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005176 (3e-85) |
| Best Drosophila hit | synapse protein 25, isoform A (2e-87) |
| Best Human hit | synaptosomal-associated protein 25 isoform SNAP25B (2e-54) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP001394-PA [Tribolium castaneum] (2e-100) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP001394-PA [Tribolium castaneum] (1e-100) |
| GeneOntology terms | GO:0005484 SNAP receptor activity GO:0005886 plasma membrane GO:0016081 synaptic vesicle docking involved in exocytosis GO:0005483 soluble NSF attachment protein activity GO:0016192 vesicle-mediated transport GO:0007269 neurotransmitter secretion GO:0006893 Golgi to plasma membrane transport GO:0045202 synapse GO:0007268 synaptic transmission GO:0048172 regulation of short-term neuronal synaptic plasticity GO:0016082 synaptic vesicle priming GO:0048489 synaptic vesicle transport |
| InterPro families | IPR000727 Target SNARE coiled-coil domain IPR000928 SNAP-25 |
| Orthology group | MCL12696 |
Nucleotide sequence:
ATGCCTTCAGCAGCGCCCCCAGCAGAAAATGGCGCGCCGCGCAGCGAACTTGAGCAATTG
CAATTACGAGCCGGCCAGGTCACGGATGAATCCCTGGAGTCGACCCGGCGTATGATGCAA
CTATGCGAAGAGAGCAAGGAGGCCGGCATTCGTACTCTGGTCGCTCTAGACGACCAGGGA
GCTCGATGCGATCTGTGTCAGTGCGAGGCTGGCGGCACAGCCTCCGCGCGTACGCTCCTC
CACGCCGCCCTAGTTAGTCACGAGGTGGGCATGAAAACCCTGGTCATGCTGGATGAACAG
GGGGAACAACTGGACAGAATCGAGGAGGGTATGGATCAAATTAACGCTGACATGCGTGAG
GCTGAGAAGAATCTCTCGGGGATGGAGAAATGTTGTGGCATTTGCGTTCTACCTTGCAAC
AAGGGGGCGTCATTCAAGGAAGATGATGGTACATGGAAAGGGAACGATGATGGTAAGGTG
GTGAACAACCAGCCACAGCGTGTTATGGACGAGCGGAACGGCATCGGACCACAAGCTGGA
TATATTGGCAGGATAACAAACGACGCTCGCGAAGACGAGATGGAAGAGAACATGGGCCAG
GTGAACACCATGATCGGTAACTTACGTAACATGGCCATTGACATGGGCTCCGAGCTGGAG
AACCAGAATAGACAGATCGATCGTATCAACCGCAAGGGCGAATCGAACGAAACGAGGATA
ACGCTCGCCAACCAGCGCGCACACGAGCTCCTCAAGTAA
Protein sequence:
MPSAAPPAENGAPRSELEQLQLRAGQVTDESLESTRRMMQLCEESKEAGIRTLVALDDQG
ARCDLCQCEAGGTASARTLLHAALVSHEVGMKTLVMLDEQGEQLDRIEEGMDQINADMRE
AEKNLSGMEKCCGICVLPCNKGASFKEDDGTWKGNDDGKVVNNQPQRVMDERNGIGPQAG
YIGRITNDAREDEMEENMGQVNTMIGNLRNMAIDMGSELENQNRQIDRINRKGESNETRI
TLANQRAHELLK