New model in OGS2.0 | DPOGS200057  |
---|---|
Genomic Position | scaffold511:- 19373-27494 |
See gene structure | |
CDS Length | 1311 |
Paired RNAseq reads   | 3847 |
Single RNAseq reads   | 11900 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002509 (6e-60) |
Best Drosophila hit   | tropomodulin, isoform G (2e-140) |
Best Human hit | tropomodulin-1 (1e-53) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC011298 [Tribolium castaneum] (7e-163) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC011298 [Tribolium castaneum] (7e-161) |
GeneOntology terms    | GO:0007010 cytoskeleton organization GO:0005523 tropomyosin binding GO:0003779 actin binding GO:0005856 cytoskeleton GO:0045169 fusome |
InterPro families    | IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype IPR004934 Tropomodulin |
Orthology group | MCL15630 |
Nucleotide sequence:
ATGACGACGCCGGCCAAGCTTTATGGACGCGAGCTGTCGGCGTACGATGAGGTTGACGTT
GATGAGTTGCTGTCCAAGTTATCACAAGAGGAACTCACCATGTTGGCTAAAGAAGTTGAT
CCAGATGACAACTTTCTCCCTCCCTCGCAGCGGAATAACTATGCATGCGAGAAGGACCCC
ACCGGCCCCCTCAACAGGAAGAAATTAATCGAACACATAAACAAGCAAGCCTTAGAAACA
CCCGATAGGCCGGAAGTCAAACCATATGTCCCCGGTGTTGTAAGGGGTAAAAAGTGGATT
CCACCACCGCCCTCCGAGAAAGTCCGTGATGCTGAAGAGCAAATCACTATAGATCTGGGT
GATGAATATGAACAGGCACTCAGCACCGCCTCCCAGGAGGAGATTATTGATCTTGCAGCT
ATCTTGGGCTTCCACTCTATGATGAACCAAGACCAGTACCACGCCTCTCTACTGAACAAA
GGCCAGCCGGTTGGGCTCGGCTGGGACGGTATAACAAAAGCTTCTAAACCCAAGGTGTAC
CCAATGGATCCTCCCAACGACACAGACCCAGATAAGACCATCGACAGGGTCAAACAGAAT
GATCAGACGTTCCTCGATCTCAATTGGAATAATATTAAGAATATAAGTGACGAGAAATTC
GAAAAACTATTTGAGAGTCTCAAAACTAATACGCATTTGGAGGTATTGTCACTAGTGAAT
GTCGGCCTCAACGACCGTACCGCCCAACTGTTGGCCGATGCTTTGGAAGTCAACAGTACG
CTGCGTGTGGTTAACGTGGAGACGAACTTTATAAGCCCGGCGGGAGTGGTTCAGCTGGTG
AAGGCTCTGCTCACTACCACCAGCGTTGAAGAGTTCCGCGCTTCGAACCAGCGGTCGCAA
GTCCTGGGCAACAAGACGGAGATGGAGATCACGCGGCTGGTGGAGCAGAATCCCACGCTG
CTGCGGCTTGGGTTGCATCTCGAGTACAGCGACGCTCGCCACCGGGTCGCTTCTCACCTG
CAGAGGAACATCGACAGAAATTGCCGATTACAAAAGCGGGCTAGCGTATCGCTAAGCTTG
CGCTTGCCGCGCGGGCGTCCGCCGCCGGTCGGAGTCGACTCTAGCTTCTTCAACCTAACG
CCCCCTAGCGCTGAGACTCCAACGCCGACGAGCGAGCGAAGAATTAACGATAAACCTATA
ATGGAAACAGATAATGAGAACGGTTTCCCTAATGCGAGGACGCCAGATATAGACCCCGCT
ACCCACTTTACGCCAACAACGCCGGAGCCAGAGCGGCGCTTAGAATTCTAA
Protein sequence:
MTTPAKLYGRELSAYDEVDVDELLSKLSQEELTMLAKEVDPDDNFLPPSQRNNYACEKDP
TGPLNRKKLIEHINKQALETPDRPEVKPYVPGVVRGKKWIPPPPSEKVRDAEEQITIDLG
DEYEQALSTASQEEIIDLAAILGFHSMMNQDQYHASLLNKGQPVGLGWDGITKASKPKVY
PMDPPNDTDPDKTIDRVKQNDQTFLDLNWNNIKNISDEKFEKLFESLKTNTHLEVLSLVN
VGLNDRTAQLLADALEVNSTLRVVNVETNFISPAGVVQLVKALLTTTSVEEFRASNQRSQ
VLGNKTEMEITRLVEQNPTLLRLGLHLEYSDARHRVASHLQRNIDRNCRLQKRASVSLSL
RLPRGRPPPVGVDSSFFNLTPPSAETPTPTSERRINDKPIMETDNENGFPNARTPDIDPA
THFTPTTPEPERRLEF