| New model in OGS2.0 | DPOGS213275 |
|---|---|
| Genomic Position | scaffold4105:- 4075-6072 |
| See gene structure | |
| CDS Length | 1194 |
| Paired RNAseq reads | 25 |
| Single RNAseq reads | 57 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000966 (9e-154) |
| Best Drosophila hit | CG1504 (3e-71) |
| Best Human hit | leucine-rich repeat-containing protein 4B precursor (2e-17) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC007802 [Tribolium castaneum] (1e-93) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC007802 [Tribolium castaneum] (1e-88) |
| GeneOntology terms | GO:0005515 protein binding GO:0008150 biological_process |
| InterPro families | IPR003591 Leucine-rich repeat, typical subtype |
| Orthology group | MCL15217 |
Nucleotide sequence:
ATGAATCATTTTAATCGCAGGGTGGCTCGCTGGGTGGCGGCGACCCTGGCGTGGGCGGCG
ATATGCGAAGCGAGCAATGTAGCTTTGACTTCGACACTGGTGCCCTCGTGTCCGACACAA
TGCATCTGTCTATCACAATCACAGGTGGTATGTAACAGCGCTACGTTACGTGGAGTGCCG
TCGGCATTGAGTTCTAGCGTCACACAGTTATCACTGTCGCGAACTGATCTTAGAGTTCTT
CGCTCTGACGCCTTTGCACATTTACGTCAACTGCGTCGTCTATCACTTGATGCTTGTAAT
TTAACTCGTATCCGCCCGTTTGCTTTTCGAGGACTGCCACGACTTAACGAACTATACATC
CAACATACGCCACTAGCAACGGTTGACGCTTTTGCATTTGCCGCCCTTCAAAATATATCG
TCGATCATTTTGACACACAACAGGATAGCACAAATTGAAGGATATGCGTTTGCTGGGACA
AATTTTATCAAACTTATTTCCCTGCGAAATAACCCAATTAAAAAAATTTTAGCTCATGCA
TTCTCTGGTCTCAATGATGTTACTCAGATTGAGTTACCATCCGGTATAAAATCTATCGAA
CCGCAAGCGTTCGCGGGATTAGAAGGCATTGGAATATTAGAATTAGCATATATGGATTTA
CCGGCACTTCTACCTGATACTTTTCATGGACTAACTAGAGTTGGACGTCTGGCTTTGCGA
GAGTCCGATTTAGGAGTCATAAAAGTTGGAGCGTTTGATGGACTGCGGCGAGTTGATATT
TTGGAGATGTGTAACAACAAAATAGATGGTATTGAAGAATTGTCTCTAATACAGAACAAT
AGCGTCCGGACTTTTAAATTAAGTGGTAATCACATGCTTGAAACACCGGAGGCTGTGGTT
TTAGAAGTGGAAAACATCGTGATTCGCGGAAACCATTTACCTTGCGAGTGCGGACGTGAT
CCTCTCGTTAATCCATTGGCATTGACACCGGATTTTGCCGAAGAAAATTTATGTATATCC
CCTCTAAAAGTTCGTGGTCGCAGTTTGGCGAGTGCTGGAGGTGCGGCGTGTCGTGGAGAA
GGCGCTGGTAGTGCACGAGCTCGGGCCGCGGCGGGTGCCTCCCCCTCAGTATATTCCCTC
GCACCCCGTCTAGCCTTCTCGCTAGCTGCGCTCGCTTTCCTTGCAAACAGCTAA
Protein sequence:
MNHFNRRVARWVAATLAWAAICEASNVALTSTLVPSCPTQCICLSQSQVVCNSATLRGVP
SALSSSVTQLSLSRTDLRVLRSDAFAHLRQLRRLSLDACNLTRIRPFAFRGLPRLNELYI
QHTPLATVDAFAFAALQNISSIILTHNRIAQIEGYAFAGTNFIKLISLRNNPIKKILAHA
FSGLNDVTQIELPSGIKSIEPQAFAGLEGIGILELAYMDLPALLPDTFHGLTRVGRLALR
ESDLGVIKVGAFDGLRRVDILEMCNNKIDGIEELSLIQNNSVRTFKLSGNHMLETPEAVV
LEVENIVIRGNHLPCECGRDPLVNPLALTPDFAEENLCISPLKVRGRSLASAGGAACRGE
GAGSARARAAAGASPSVYSLAPRLAFSLAALAFLANS