| Genomic Position | scaffold2677:+ 3807-8383 |
|---|---|
| See gene structure | |
| CDS Length | 1761 |
| Paired RNAseq reads | 1498 |
| Single RNAseq reads | 4856 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013472 (4e-08) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (5e-154) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] (1e-141) |
| GeneOntology terms | GO:0006278 RNA-dependent DNA replication GO:0003723 RNA binding GO:0003964 RNA-directed DNA polymerase activity |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10014 |
Nucleotide sequence:
ATGGTTAGGACTGCTGTTGGCGATACAAAACCCTTTCCGATCTCAGTAGGGGTTCACCAA
GGCTCGGCTCTTAGCCCCTTCTTGTTCAATGTAGTGCTGGACACTGTCTCGGCTAACATC
CAGGACCAGCCTCCATGGCTGATGATGTATGCCGATGACATAGCGCTCATTGATGAGAGC
AGGTTGACGCTAGAGCGAAGAGTGAACCTCTGGAAGGGTACGCTTGAGAACGGTGGTCTT
AAACTAAATGTGACGAAGACCGAGTACATGGCTTGCGGAAGCCCGGACTCTTGCACTATC
CATATAGGTCCTGAACCAGCCGTTAAGTCGGAAAAGTTCAGGTACCTTGGATCTATTCTG
CATGAGTCCGGAGGCATCGATCACGATGTCCAAGCCCGGATCAGCGCTGCTTGGGCGAAA
TGGCGTGAGGTCACAGGTGTGGTCTGCGATCGCAGAATACCTACCAAGCTCAAGGGAATA
ATATACAAGAGCATAATCCGACCGGTTCTCTTATATGGAAGCGAATGTTGGCCAACACTG
TCCAGGCACACTCAGGAGCTTCACGTCACGGAGATGAAGATGCTGAGGTGGATGTGTGGC
GTAACGCGGGCTGACCGTATACGTAACACATTTATCCGAGGTAGTCTTGGAGTCCGTGAC
GTAGCGGATAAGCTTCAAGAGAGTCGCCTGAGATGGTATGGCCACGTTGCACGCCGGCCT
GAGAATTACGTCGGAAAAATTTGCCTTGATATGTCGGTCCCTGGAGCAAGACCCCCAGGA
CGCCCAAGAAAGCGATGGCTGGACACCGTGAAGCAGGATATGAGAGCCAATGGACTTACC
ACCGCGGATGCTAAAGACCGTGCAAACAAGATTAAGTTTACTATAGAATTAGAGGCAAAT
AATTCTTTAGCTTTCCTTGATATACTTGTCATTAGGAATCCTGACAATACTTTGGGACAT
ACGGTTTATAGGAAACCCACACATACCAATAGGTATCTCAATGGTAACTCACACCACCAC
CCTATACAGTTAGCTACCGTTGGCAAATCTTTGTTACAGAGAGCCCAACACCTTTGTGAT
GCTGACCACCTAGAGGCCGAGCTGCAGCATGTAAAACATGCTCTCACCATCAACAACCTG
CCCGTGCCTCGCCAGCATCGCAAGAACCACCTGAAGCCACCCACAGTTGAACGACAACCT
GCGATACTACCATATGTGAAGGGAGTTACTGACAGAATAGGCAACATCTTGAAGAAGGTT
TCCATTAAAACTATTTACAAACCACATAAGAAAGTGAGCCAATTCTTGAGACCAATCAAG
AGTAACATTCCTTTACAACAAGCGGGTGTATACAAACTCGACTGTGACTGTGGCTTGTCA
TACATTGGACAGACGAAGAGGAGCATCGGTACAAGGGTTAAGGAACACATCTCAGACATC
AAAAACAGGCGCGCGTCGAAGTCAGCAGTGTGTGAACACACAATGGACAAACCAGGCCAC
TACATTCGTTTTGATAAACCTCAAATCCTCGCTCGGGAAGACAAGTATATACCGAGATTA
ATTCGCGAGGCTATTGAAATTAAAAAACATCCCAATTTCAATAGAGAAGATGGCTGGAAT
CTATCAAACACCTGGGACCCCGTTCTTAAAAATATAAAATCCCATGTCCGAAACCACACC
GCAGGACCTCAAGACACCGTGAGCGCATTCTGCCGGCATCCAGAGCGGTACGCCAGAAAA
TTAAGAAATCGATGGCGGTAG
Protein sequence:
MVRTAVGDTKPFPISVGVHQGSALSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDES
RLTLERRVNLWKGTLENGGLKLNVTKTEYMACGSPDSCTIHIGPEPAVKSEKFRYLGSIL
HESGGIDHDVQARISAAWAKWREVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTL
SRHTQELHVTEMKMLRWMCGVTRADRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRP
ENYVGKICLDMSVPGARPPGRPRKRWLDTVKQDMRANGLTTADAKDRANKIKFTIELEAN
NSLAFLDILVIRNPDNTLGHTVYRKPTHTNRYLNGNSHHHPIQLATVGKSLLQRAQHLCD
ADHLEAELQHVKHALTINNLPVPRQHRKNHLKPPTVERQPAILPYVKGVTDRIGNILKKV
SIKTIYKPHKKVSQFLRPIKSNIPLQQAGVYKLDCDCGLSYIGQTKRSIGTRVKEHISDI
KNRRASKSAVCEHTMDKPGHYIRFDKPQILAREDKYIPRLIREAIEIKKHPNFNREDGWN
LSNTWDPVLKNIKSHVRNHTAGPQDTVSAFCRHPERYARKLRNRWR