| New model in OGS2.0 | DPOGS210600 |
|---|---|
| Genomic Position | scaffold19:- 19886-23079 |
| See gene structure | |
| CDS Length | 1908 |
| Paired RNAseq reads | 453 |
| Single RNAseq reads | 1293 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014415 (6e-37) |
| Best Drosophila hit | CG5222 (5e-170) |
| Best Human hit | integrator complex subunit 9 isoform 1 (9e-141) |
| Best NR hit (blastp) | conserved hypothetical protein [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (2e-176) |
| GeneOntology terms | GO:0006378 mRNA polyadenylation GO:0005847 mRNA cleavage and polyadenylation specificity factor complex GO:0006379 mRNA cleavage |
| InterPro families | IPR022712 Beta-Casp domain |
| Orthology group | MCL14745 |
Nucleotide sequence:
ATGAAACTGTATTGTTTAAGTAGCGACGCGGCCAAGCCATGCTTCGTGTTATCGTTCAAG
GAGCTCTTGATCATGTTAGACTGTGGATTGTCAGCGCACTCCGTGTTGAACTTCCTTCCA
CTACCACCAGTACCAAGTACAAGACTTGCCTCACTGCCCAACTATACTCCACCACATGTC
AACGACCCTCTACTAGAAGGGGAACTCAAGGAATGCTGCGGTCGTGTCTTTGTGGATAGT
GTACCAGAATTCTGTCCACCCCTCGATAAGGTGGTAGACTTCTCCCAGCTGGACGTCATT
CTAATATCCAACTACACATGTATGATGGCTCTGCCCTTCATAACGGAAGACACGGGTTTT
AAAGGACAAGTTTACGCGACCGAGCCCACTCTCCAGATAGGCAGGTTCTACCTCGAGGAG
CTCTCGGAGTGGGTGTCGGGGAGCGGCGGCGGCGCGGGCGCGGCCAAGAGATGGAAGGAG
CTCGTACACTTGTTACCGCCGCCTCTGGCCTCTGCGCTCCGGCCGCGAGCCTGGCGTCGC
CTGTTCTCGCCCGGGGCTCTAGCGCGCGCTCTGTCGAGGGTTCGGGTCGTGGGCTACGAC
GAGCGAGTCGACATCTACGGTGCGCTCGACGCCACAGCCGTCAGCTCGGGGTTCTGCCTC
GGCTCCGCGAATTGGGTTCTGCGGTCGGCGCACGAAAAGGTGGCTTACGTGAGCGGCTCC
AGCACCCTGACCACTCACCCGCGACCCATCAACCAGGCTGCGCTGCGAGGCGCCGATCTC
CTGGTGCTGGCCGCCCTGACGCAGACTCCGGCGCACAACCCCGACCACATGTTGGGAGAC
CTGTGCGTGCACGCCACCGTGACACTGCGGGCGGGCGGCTCCGTGCTGTGTCCGGTGTAC
CCGAGCGGCGTGCTCTACGACTTGTTGGAGTGTCTCTCGGCTCACCTGGAAGGCGCGGGC
CTAGCTCACGTGCCGCTGTACGTGGTCTCGCCCGTCGCCGACTCCTCCTTGGCTTATAGT
AACATCCTCGCGGAGTGGGTATCGGTGGGTAAGCAGGCGCGCGTCTACCTCCCCGAGGAG
CCATTTCCTCACGCGGCACTCGTCCGCGCGGGCCGCCTCAAGCACGCCCGCTCCCTACAC
GACGACGCCTTCAGCGCGGACTTCCGTCAGCCCTGCGTCGTATTCTGCGGTCATCCGAGT
CTGCGGTTCGGAGCGGCCGTCCACCTCGTTGAGCTCTGGGCGAACAATCCCGCTCACGCC
ATAATATTTACCGAGCCGGACTTCCCTCACGCTGAGGCGCTCGCCCCCTTCCAGCCACTG
AGCATGAAGGCCTTCCACTGTCCGATAGACACGTCCCTCAACTACTCACAGGCCAACAAG
CTGGTCCGCGAGCTGCGGCCGCGCGAGTTGGCCCTGCCCGAGCAGTATGCGGCGTCCGGC
GGGACGGCGGCGGGCGGCGGGGCGGCGGCGAGCGGCGGGGCAGGCGGAACGAGACCTCAC
ATCGGCGCTGACGTGCCGACTGTGGTGGTCCGGCGCGGAGCCGCGCGGTCTCTGGGCCTC
CGGGCCGGTCTGCGCGCAGCGCCCCTGACAGCCGCCTTGCGCGTGCGTGACGCGCGCCTC
GAGCTTGTAGCACCGGCGGCGTGCGGAACTCCCGGCACGGAGGCAGCCCCGGCGCCCGTC
CTACACTGGAGCGCCCTGGACGTGGAAGCGCTGGTGCGGGCGCTGGCAAGGGAGGGCGTG
TCGGAGGCGCGGGTAGAGGCGGGCGCGGACGGCTGTATAGTGCATCTCCCGCGACACGAC
ACGCTGGTCCACGTCGAGCGACACGCCACTCACGTGTTCTGCGAGGGTCGCTCGGACGTG
CGTCAGGCGCTGAGACGGGCGCTGGCCGCGTGTCTGCCACACATCTAA
Protein sequence:
MKLYCLSSDAAKPCFVLSFKELLIMLDCGLSAHSVLNFLPLPPVPSTRLASLPNYTPPHV
NDPLLEGELKECCGRVFVDSVPEFCPPLDKVVDFSQLDVILISNYTCMMALPFITEDTGF
KGQVYATEPTLQIGRFYLEELSEWVSGSGGGAGAAKRWKELVHLLPPPLASALRPRAWRR
LFSPGALARALSRVRVVGYDERVDIYGALDATAVSSGFCLGSANWVLRSAHEKVAYVSGS
STLTTHPRPINQAALRGADLLVLAALTQTPAHNPDHMLGDLCVHATVTLRAGGSVLCPVY
PSGVLYDLLECLSAHLEGAGLAHVPLYVVSPVADSSLAYSNILAEWVSVGKQARVYLPEE
PFPHAALVRAGRLKHARSLHDDAFSADFRQPCVVFCGHPSLRFGAAVHLVELWANNPAHA
IIFTEPDFPHAEALAPFQPLSMKAFHCPIDTSLNYSQANKLVRELRPRELALPEQYAASG
GTAAGGGAAASGGAGGTRPHIGADVPTVVVRRGAARSLGLRAGLRAAPLTAALRVRDARL
ELVAPAACGTPGTEAAPAPVLHWSALDVEALVRALAREGVSEARVEAGADGCIVHLPRHD
TLVHVERHATHVFCEGRSDVRQALRRALAACLPHI