DPGLEAN11570 in OGS1.0

New model in OGS2.0DPOGS210602 
Genomic Positionscaffold19:- 6557-10380
See gene structure
CDS Length1872
Paired RNAseq reads  8278
Single RNAseq reads  21872
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA014417 (1e-08)
Best Drosophila hit  CG7461 (0.0)
Best Human hitvery long-chain specific acyl-CoA dehydrogenase, mitochondrial isoform 2 precursor (7e-171)
Best NR hit (blastp)  PREDICTED: similar to acyl-coa dehydrogenase [Acyrthosiphon pisum] (0.0)
Best NR hit (blastx)  PREDICTED: similar to acyl-coa dehydrogenase isoform 1 [Tribolium castaneum] (0.0)
GeneOntology terms



  
GO:0017099 very long-chain-acyl-CoA dehydrogenase activity
GO:0055114 oxidation reduction
GO:0050660 FAD binding
GO:0005811 lipid particle
GO:0005875 microtubule associated complex
InterPro families





  
IPR009100 Acyl-CoA dehydrogenase/oxidase
IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal
IPR006089 Acyl-CoA dehydrogenase, conserved site
IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal
IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain
IPR006090 Acyl-CoA oxidase/dehydrogenase, type 1
IPR006092 Acyl-CoA dehydrogenase, N-terminal
Orthology groupMCL12087

Nucleotide sequence:

ATGAAAGGATCCAAGATGGTAACATGCGCAAGTCGCTGCTTCGGTGGCAGCAAGCGACTC
CTTCCGATGCGGAGCCGCTGCATGGCGACGGCCGCGGCCGCTGAAGCTCCCCGCGGAGCG
CGTCAGAGTACATCCTTCACACTGAACCTGTTCCGAGGTCAGTTCGAGCCGACGCAGGTG
TTTCCATTCCCGGAGCCACTCTCCGAAGACCAGCGTCAGACTCTCAGCGAACTCGTTCCA
CCGGTCGAGAAGTTCTTTCAGGAGGTGAACGATCCGGCCAAGAACGACGCGGACGCACAG
ATCGAGCAGGCTACTCTGTCGGGACTGTGGGATTTGGGTGCCTTCGGTCTCCAGGTGCCG
ACGGACTTGGGCGGACTGGGACTATCCAATACGCAGTACGCGCGGCTAGTGGAGGTGGTC
GGCGCTCACGACCTGGGCGTGGGCATCACGTTGGGTGCTCACCAGTCCATCGGTTTCAAG
GGCATATTGCTTTTCGGCACGCCGGAACAGAAGCAGCATTACTTACCGCGCGTTACGGGC
GGAGAATATGCGGCTTTCTGCTTGACAGAGCCGTCGTCGGGCTCCGACGCCGGCTCCATT
AAAACGAGAGCAGAACTGTCTCCTGACGGGAAGCACTTCATTCTAAATGGATCCAAAATT
TGGATCAGCAATGGTGGAATCGCTGAGATCATGACCGTGTTTGCTCAAACACCCGTCGAA
AAAGACGGAAAAAAAGTTGATAAAGTGACGGCTTTCATTGTGGAACGATCGTTTGGCGGC
GTATCGTCGGGTCCTCCCGAGAACAAGATGGGTATCAAGTGTTCAAATACCACGGAAGTG
TACTACGAGGACGTGCGGGTCCCGGTAGAGAACGTGCTGGGCGGAGTCGGGAACGGGTTC
AAGGTGGCCATGAATATCCTCAACAACGGCCGCTTCGGCATGGCGGCGGCGCTGGGCGGC
ACGCAGCGCGCCGCCCTGCGGCAGGCCGCGGAACATGCCGCCACTAGGGTTCAGTTCGGT
AAACGGCTCTGTGAGTTCGGTTCCGTCCAAGAGAAGCTGGCGCGTATGGCGATGCTGCAG
TACGTGACGGAGTCGCTCGCCTACATGGTGAGCGGCAACATGGACGCCGGCCACCAGGAC
TACCACCTTGAGGCGGCGGTGTCCAAGGTATTCGCGTCGGACTCCGCTTGGAAGGTTGTG
GACGAGGCGATCCAGATCCTCGGAGGTATGGGCTTCATGAAGGCCACGGGGCTGGAGCGC
GTGCTGAGGGACCTGCGAATCTTCCGCATCTTCGAGGGAACCAACGATATCTTGCGGCTC
TTCGTCGCTCTCACGGGAATTCAGTTTGCGGGCTCGCACCTCCAGGAGGTGATGCGTGCC
TTCAAAAACCCGACAGCGCATCTCGGACTCATTTTTAGCGAAGCCGGCAAGCGCGCCGGA
CGGGCCGTGGGGTTCGCGCGGGGCGCGGATCTCGACCCGCTGGTGGCGCCGGCGCTCCGC
CCCGCGGCGAGGGAGCTGGCGCGCCGGGTGTTGGAGTACGGGGCGTGTGTCGAGGCCGCG
CTCCGTAAATACGGCCGCGGCGTGGTCGACGAGCAGCTCGTACTGAACAGTCTGGCGGCC
GGCGCCATCGACGCCTACACGGCGGCCGCCGTGTTATCTCGTGCTTCGAGAGCGCATCGC
CTCGGGCTCCCGGCCGCCGACCACGAGCTGGCCATGGCCGAGACCTGGACAGAGGAAGCC
ACGGACCGCATGGGAGCTTTGGCGGGCGCTCTGGCCCCGCGGGCCTTGAGACACGGCGCG
CGGCTGACAGCTCTGGGGCGCGATGTGGCCGCCGCAGCCGGACAACCTTCGCGCTCCCCT
CTCGGCCTGTGA

Protein sequence:

MKGSKMVTCASRCFGGSKRLLPMRSRCMATAAAAEAPRGARQSTSFTLNLFRGQFEPTQV
FPFPEPLSEDQRQTLSELVPPVEKFFQEVNDPAKNDADAQIEQATLSGLWDLGAFGLQVP
TDLGGLGLSNTQYARLVEVVGAHDLGVGITLGAHQSIGFKGILLFGTPEQKQHYLPRVTG
GEYAAFCLTEPSSGSDAGSIKTRAELSPDGKHFILNGSKIWISNGGIAEIMTVFAQTPVE
KDGKKVDKVTAFIVERSFGGVSSGPPENKMGIKCSNTTEVYYEDVRVPVENVLGGVGNGF
KVAMNILNNGRFGMAAALGGTQRAALRQAAEHAATRVQFGKRLCEFGSVQEKLARMAMLQ
YVTESLAYMVSGNMDAGHQDYHLEAAVSKVFASDSAWKVVDEAIQILGGMGFMKATGLER
VLRDLRIFRIFEGTNDILRLFVALTGIQFAGSHLQEVMRAFKNPTAHLGLIFSEAGKRAG
RAVGFARGADLDPLVAPALRPAARELARRVLEYGACVEAALRKYGRGVVDEQLVLNSLAA
GAIDAYTAAAVLSRASRAHRLGLPAADHELAMAETWTEEATDRMGALAGALAPRALRHGA
RLTALGRDVAAAAGQPSRSPLGL