| New model in OGS2.0 | DPOGS211395 |
|---|---|
| Genomic Position | scaffold62083:+ 508-2354 |
| See gene structure | |
| CDS Length | 681 |
| Paired RNAseq reads | 581 |
| Single RNAseq reads | 3113 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010853 (4e-38) |
| Best Drosophila hit | sec24 (2e-35) |
| Best Human hit | protein transport protein Sec24A (7e-37) |
| Best NR hit (blastp) | PREDICTED: similar to Sec24B protein, putative [Tribolium castaneum] (4e-55) |
| Best NR hit (blastx) | PREDICTED: similar to Sec24B protein, putative [Tribolium castaneum] (2e-45) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005515 protein binding GO:0005783 endoplasmic reticulum GO:0005789 endoplasmic reticulum membrane GO:0016020 membrane GO:0005737 cytoplasm GO:0016192 vesicle-mediated transport GO:0048471 perinuclear region of cytoplasm GO:0005794 Golgi apparatus GO:0000139 Golgi membrane GO:0006888 ER to Golgi vesicle-mediated transport GO:0008270 zinc ion binding GO:0016044 cellular membrane organization GO:0030127 COPII vesicle coat GO:0006886 intracellular protein transport |
| InterPro families | IPR006900 Sec23/Sec24, helical domain IPR007123 Gelsolin domain |
| Orthology group | MCL40571 |
Nucleotide sequence:
ATGTCGGAAGCGAAGGAGGCTCTGATGAACGCCGCAGTGGATATGTTGAGCGCCCACCGC
CTCGCCCACAGTTTGCCCACGGGTGACCAGAGCGCCTCCCTGCACGCGCCCACCACGCTC
AGACTACTGCCGCTCCTGATACTGGCGCTACTTAAACGGAAAGCATTCCGCACGGGCACG
TCGACTCGCCTGGACGAGCGCGTCTCCGACATGCTGTTCCTGAAGACCGCGCCGCTGGCG
AGTCTCCTGCGGGCCGTGCACCCCGACCTGTACGAGCTGCACACGCTCTCCAGCCAGCAC
CAGCCGCCGCGGCTCCAGCTGTCCGCCGAGAGACTGAGCCTGGACGGCGCGTACCTCCTG
GACGAGGGGGAGACCATGGTGATATACGTGTGTCGGGGGGTCAGCGCCGCCTGGCTGTCC
GAGGCGCTGGGGGTCAACTCGTTCGCGGAGCTGCCGGCCGAGGGTCGCGACCTGCCGCAC
TTAGACACCGGCCTCAACGACCTGCTGCACGGGTTCATCGACCGCCTCAACGAGGACCGC
CCTTACGCCGCCGGCCTGCTACTGCTCAGAGACGACTCGCCGTCCCGCCAACTGTTCACG
GAGCGCCTGGTGGAGGACCGCGTGGAATCCGCTTTCTCTTACTACGAGTTCCTGCAACAC
CTCAAGAGCCAAGTGAAATGA
Protein sequence:
MSEAKEALMNAAVDMLSAHRLAHSLPTGDQSASLHAPTTLRLLPLLILALLKRKAFRTGT
STRLDERVSDMLFLKTAPLASLLRAVHPDLYELHTLSSQHQPPRLQLSAERLSLDGAYLL
DEGETMVIYVCRGVSAAWLSEALGVNSFAELPAEGRDLPHLDTGLNDLLHGFIDRLNEDR
PYAAGLLLLRDDSPSRQLFTERLVEDRVESAFSYYEFLQHLKSQVK