| New model in OGS2.0 | DPOGS213413 |
|---|---|
| Genomic Position | scaffold1323:- 86149-88483 |
| See gene structure | |
| CDS Length | 2067 |
| Paired RNAseq reads | 569 |
| Single RNAseq reads | 1368 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004389 (0.0) |
| Best Drosophila hit | crooked legs, isoform A (1e-28) |
| Best Human hit | zinc finger protein 180 (4e-37) |
| Best NR hit (blastp) | PREDICTED: similar to Zinc finger protein 268 (Zinc finger protein 3) (HZF3) [Acyrthosiphon pisum] (2e-46) |
| Best NR hit (blastx) | PREDICTED: similar to Zinc finger protein 268 (Zinc finger protein 3) (HZF3) [Acyrthosiphon pisum] (3e-46) |
| GeneOntology terms | GO:0005634 nucleus GO:0003676 nucleic acid binding GO:0046872 metal ion binding GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0005622 intracellular |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR012934 Zinc finger, AD-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL19130 |
Nucleotide sequence:
ATGGATTCGTTTACAAATTTGTGTCGAAGCTGTCTTAGTCCAGAAACTGGAGTGTCACTT
TGTGATAATGAAGACAATATCAAAGAGAAATTCTTCGAAGTTACCACTGTCGAGGTCAAG
GAAGATGATGGCTTACCTCAAAAGCTTTGCAATGACTGTTTCACTCTTATGACATCAGCA
TATCAATTTCGCAATCAATGCATGAAAATGGATAAAGAACTTAGGCTTCAATTGGAAGCT
TACATCAATGAGAGCGCAGAACAATTTTCACAAATAGAAACACAACTAAAGGCCAGCGAG
GACATGACGATAGAGGATATAGCTAAAGAATCAATGAAACAATTAGAATCTATTATTAAG
AGCGAGCCTAATGATAGTGACGATGATTATTATTATGTGGTTGTAGTCGACAACAATAAA
GATGATGAGAGTGACAAAAGCAACAGCAACAGTGCGGTTACACCATCCATTAAAAAAGAA
AGTACCACTGAAGACATCATAATGAAGACTTCCGACCATAGCACACAGTTTGAGAATTGT
ATAGATTCATTTCTAGTGACAAATCCAAAAGTGCCAAATAATGTACCAGCGACCATCCTT
GAGAACGAGGAACAAGAAATAGATGAAAATTTCACCAGCGTAGATGAATTATCTCAGGAC
CATTCTCTCGGTATAACAGAAGACTCTCAAGATAAGAGTGACGATTACACTGTGGCTGTG
CCACAAAACATGAAGAATAACATAGGGAACTCTAAAAGTTACATCAAAATTCTTACCCCA
TCTGGCGCAGAAAGAACAATACTTGTGAAAAATGAAGATGGTGTTAAATATTTAACAGAT
GCTCAGCTCCTTAAGGATGGTACGGATTCTTTGTCTCAAGAAGAAGTTATTTTTTATGAA
GGTGATGATGCATCACAGTTGCAGATACTGAAATGTGATGGTTCCGAGTTAGTTATAGAG
TATGCTGATGACAGTCAGATAGCAACAGTTCTGCAACAAGAAGATGGCACTTTCTTGTGT
GATTGCGGTGAACAGTTTGATGATTTTGCCGAATATGAAAAACATCAATACAAACATAAC
CCGGCTGGAGAACATTTGTGTAATTTATGTGGTAAAGGCTTTGAAACTGCTGAAGTTCTG
ACTGGGCACATGCTGTTACATAGCGTGACAAGTGTATATGTTACATGTCCATTCTGTTGC
CAAAAAGTAAGGAGAAACAGTCTCACGCAACACATAAAATATGTACACAATACAAAACCA
CAATGTGATATCTGTTCAAAGACATTTGCAAATCAAAATAATTTAAAAAGGCATTTGATG
ATACACAGCGGGATAAAAGATTTTGAATGTGATATATGCCACAAGAGGTTCCATCAAAAA
ATAACCATGCAAACGCACAGACTGACACATGTCAATCCATTCACATGCAATCAATGTGGA
CTACAATTCAGCGAAAAAGCCGATTTAACTGCCCATAAGAGTTCAGAAGAGTGCAGTAAG
ACAAGAATAACCAAAGTTAAGGAGGAATTAATGAAGACTGTGAAACAGGAAGTCGTATCC
AACCTCGGAAAGTTATTAGGCTATGCCTGTTCGTTATGCAAAAAAATGTTTACGCTTGAA
TCTGCTTTAGAGCAACATGTAGAAACTACACATATTTTCGAAAATGAGGAACAACATTTG
GAGAAGGTCCCAAAGAAGAGCAACAAAAAGTTTGACTGTCGAATATGTGGGAAGAGTTGT
GCCAGTCAGGCGATGATGATCATGCATGAAAGGGTGCACACAAACGAGAGACCGTTCCCT
TGCCAACTTTGTGCATTAAGATTCAAAACAAAAACTCATTTGCGTACACATCAATTGACA
CATACGAGGGAGAAAAAATTTGGTTGCTCTGTTTGTTTGAAATTTTTCGCACTAAAAGGT
AACCTGGTTGTCCATTTAAGAACACATACCGGGGAGAGACCGTACGTATGTTCAATATGT
GGCGAAGCTTACATAGACTCTAAATATCTTAAAAAGCACAAACAAAAGAAACATGCCATA
GACAATGTTCCTTGGAATACATATTAA
Protein sequence:
MDSFTNLCRSCLSPETGVSLCDNEDNIKEKFFEVTTVEVKEDDGLPQKLCNDCFTLMTSA
YQFRNQCMKMDKELRLQLEAYINESAEQFSQIETQLKASEDMTIEDIAKESMKQLESIIK
SEPNDSDDDYYYVVVVDNNKDDESDKSNSNSAVTPSIKKESTTEDIIMKTSDHSTQFENC
IDSFLVTNPKVPNNVPATILENEEQEIDENFTSVDELSQDHSLGITEDSQDKSDDYTVAV
PQNMKNNIGNSKSYIKILTPSGAERTILVKNEDGVKYLTDAQLLKDGTDSLSQEEVIFYE
GDDASQLQILKCDGSELVIEYADDSQIATVLQQEDGTFLCDCGEQFDDFAEYEKHQYKHN
PAGEHLCNLCGKGFETAEVLTGHMLLHSVTSVYVTCPFCCQKVRRNSLTQHIKYVHNTKP
QCDICSKTFANQNNLKRHLMIHSGIKDFECDICHKRFHQKITMQTHRLTHVNPFTCNQCG
LQFSEKADLTAHKSSEECSKTRITKVKEELMKTVKQEVVSNLGKLLGYACSLCKKMFTLE
SALEQHVETTHIFENEEQHLEKVPKKSNKKFDCRICGKSCASQAMMIMHERVHTNERPFP
CQLCALRFKTKTHLRTHQLTHTREKKFGCSVCLKFFALKGNLVVHLRTHTGERPYVCSIC
GEAYIDSKYLKKHKQKKHAIDNVPWNTY