| New model in OGS2.0 | DPOGS201726 |
|---|---|
| Genomic Position | scaffold3880:+ 6617-10411 |
| See gene structure | |
| CDS Length | 699 |
| Paired RNAseq reads | 477 |
| Single RNAseq reads | 2042 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000183 (1e-24) |
| Best Drosophila hit | CG5493 (1e-32) |
| Best Human hit | cysteine dioxygenase type 1 (2e-27) |
| Best NR hit (blastp) | GA18925 [Drosophila pseudoobscura pseudoobscura] (5e-43) |
| Best NR hit (blastx) | GA18925 [Drosophila pseudoobscura pseudoobscura] (6e-35) |
| GeneOntology terms | GO:0017172 cysteine dioxygenase activity GO:0055114 oxidation reduction GO:0046439 L-cysteine metabolic process GO:0005506 iron ion binding |
| InterPro families | IPR011051 Cupin, RmlC-type IPR010300 Cysteine dioxygenase type I IPR014710 RmlC-like jelly roll fold |
| Orthology group | MCL12825 |
Nucleotide sequence:
ATGGAAATAGAGAGCGCTAACTGTAAACATCGCGTGTCAGAGTGCACGGACTACAACCAA
CTAAATATAGAAAGACCCTTGAAAATTGTACACGATATCGATGGGTTGGAGACTCTGGTG
TCTGAACTTCATAAAGTATTTTCAAAAAACTACGTCAATATCCAGGAGGTCCAGAAGTTG
ATGTCTTCTTACAAGTCAGATCCAAAGCACTGGAAAAAATACGCAAAATTTGATCGCTTC
CGATATACGAGAAATTTGGTTGACGCTGGCAATGGCGCCTTCAATATAATGATTCTGTGC
TGGGGTCCAGGTCACGCGTCAGCTATACATGACCACGCTGATTCCCATTGCTTCATGAAG
CTGCTCAGTGGAAGCCTAGACGAAGTTAGATATGATTGGCCGAACAACGTTGAACCGGAA
GTCATGAAGAAATTGAAGAAACCCACGAGAAGGTGCTGTTCCGAGAGCGAAGACAGTGTT
ATAAATAAAATAAAAAACTTAGACATAACCAGTGATTGTGACAATTGCAACCAAAAAGAT
AAGAGCGAGAATGGGAAGTGCACAGACTACGAAGAAGAGACGGGATATGATGCTCAGGAG
ATGGAAGAGATTGGAAGAACGCGTCTGGACATAGATGACGTTTGTTACATTAACGGTGAG
TTGAAAATATTACTGCCATGCCAAATGCCATCTAGATAA
Protein sequence:
MEIESANCKHRVSECTDYNQLNIERPLKIVHDIDGLETLVSELHKVFSKNYVNIQEVQKL
MSSYKSDPKHWKKYAKFDRFRYTRNLVDAGNGAFNIMILCWGPGHASAIHDHADSHCFMK
LLSGSLDEVRYDWPNNVEPEVMKKLKKPTRRCCSESEDSVINKIKNLDITSDCDNCNQKD
KSENGKCTDYEEETGYDAQEMEEIGRTRLDIDDVCYINGELKILLPCQMPSR