| New model in OGS2.0 | DPOGS203112 |
|---|---|
| Genomic Position | scaffold129:- 100859-106544 |
| See gene structure | |
| CDS Length | 2967 |
| Paired RNAseq reads | 985 |
| Single RNAseq reads | 2112 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001522 (0.0) |
| Best Drosophila hit | CG33158 (0.0) |
| Best Human hit | elongation factor Tu GTP-binding domain-containing protein 1 isoform 1 (0.0) |
| Best NR hit (blastp) | translation elongation factor, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | translation elongation factor, putative [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0003746 translation elongation factor activity GO:0003924 GTPase activity GO:0005525 GTP binding GO:0006412 translation GO:0000166 nucleotide binding |
| InterPro families | IPR020568 Ribosomal protein S5 domain 2-type fold IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel IPR009022 Elongation factor G/III/V IPR000795 Protein synthesis factor, GTP-binding IPR004161 Translation elongation factor EFTu/EF1A, domain 2 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup IPR005225 Small GTP-binding protein |
| Orthology group | MCL13732 |
Nucleotide sequence:
ATGAGACTAGTAAGTTCAACGAAACTTTTAGAACTTCAAAAGAAAACTTCGCAGATTCGA
AATATATGTATCGTAGCACACGTGGATCATGGAAAAACAACCCTGGCAGATTCTTTAATA
TCGAGCAATGGTATTATATCGCAAAGATTGTCTGGAAAACTTCGCTATATGGATAGCAGG
CCTGATGAACAGGAGAGGGGTATCACTATGAAAAGCAGTAGTATAGCATTGTATCATGCA
TTGGAAGGTGAAGAACATCTTGTAAATTTGATTGATTCTCCGGGGCATATTGATTTTTCA
AGTGAAGTGTCAACTGCAGTCCGATTATGTGATGGTGCAATAGTAGTTGTTGATGTAGTA
GAAGGTGTATGTCCGCAAACAAGACTGGTATTAAAACAGGCATATTCGGAAAATATGAAA
GCAGTTTTAGTATTCAATAAAATTGACCGGCTCATTGTGGAGATGAAAATGACAGCGCTA
GATGCATATGTTCATATAGCACAGTTGTTGGAACAAGTCAATGCTGTGATGGGTGAACTT
TTTGCATCGGAAGTATTAGAAAATGAAGAAACATTGATTGATAAACAGCAACAGAAACCG
AACCCAAAGGAGGACAATAATTTCTATGATTGGACGTCAGCTTTAGAAGATTCAGACGAC
TCCAACCTGTATTTCTCACCTGAGCAAGGGAATGTTGTTTTTGCGAGTGCTATAGATGGA
TGGGGTTTCACTGTGCACACTTTTGCGAAACTTTTTTCTGATAAACTTGGTGTCAAAGAA
GAGCTTCTCACTAAGGTACTTTGGGGTGATTTTTATTTGAATCCAAAAACTAAGCGTTTT
ATGAAAGGTGCCCAAGAGAAAGCTAAGAAACCGCTTTTCGTCCAGCTCGTTCTTGACAAT
CTTTGGAATATTTATGAAACGATTGTTCTAAGAAATGACAAAGACAAAGTACCTAGCATG
TGTGAAAAATTAGGTATCAAACTTACAACACGAGATTTAAGACACACGGACAGTAGGGTC
CAACTGCAGTCACTGATGATGCAATGGCTGCCTTTGTCTAATACAGTTTTAGATATGGTG
TGTAGGAAGCTACCATCTCCAAAGGAAATACTACCCGAGAAAGTTGAGAAATTAATGTGT
TCACGTATACGCGATTTCGAATCTTATTCGGACGAAACAAAGGAACTCAAAAAAGATTTC
CTTGCCTGTGATAGTAGCAACGATAGACCTGTGATTGTATTTATATCTAAAATGTTTAGC
ATAGATAAAAGTATGTTGCCTTCAAACAAACCTAAAGCGCTTACACCGGAAGAAATGGCG
TTGCGACGAGAGAGAGCAAGACAAATGCGTGATGCTCTGAAACATAGTGAAAAATCTGAA
CCAATTCCAGTTAAAACAGAGGAATTAGTTGAAAATGATAAAGAAAAACACGCAACAGAT
GAACAAGAAAAGGAAGATGGTGACGATACAGCATTTATAGCATTCGCTAGAATATTTAGT
GGTAGAATTAAGAAAGGGGATAAACTTTATGTACTGGGTCCAAAACACGATCCATCCCAG
GTACTGATGAACAAGGAGTTCAATATAGATCCCAATAAGAAATTAAAAGACTTACAGAGC
GACGAACATATAACTTGTGCTGAGATCAAATCTCTATACGTACTAATGGGAAGAGAATTA
GAAGATTTAGAAGAAGCAGTTGCCGGCAATGTTATAGGTATTGGTGGTCTTGAAGATCAT
ATATTGAAAACAGCAACATTAAGTAGTACAGTAGCATGTCCTTCGTTCAGTGAGATTCAA
TATGCAGCAGTGCCAATACTTAGGGTTGCCATAGAACCCACATACCCATCACAGTTACCT
CAGCTTGTTAAAGGTTTGAAACTATTAAATCAATCGGACTCGTGCGTTCAAGTGTTATTA
CAAGAGAGCGGTGAACATGTTTTAGTGACAGCTGGTGAAGTACATCTACAGAGATGCTTA
GAGGATCTCAAAAATCTATATGCGAAAATACCAATAACTGTCTCTGAACCAATAGTACCG
TTCAGAGAAACGATAGTCGAACCACCGAAAGTTGATATGGCGAATGAGGAAATCGATTCC
CAGAATATCGATAAAGGAAACGCCACTGACATAGATCCCGTTATTACGGTATACACAAAC
AATAAACAAAGCAAAATAAGAATACGAGCTAAACCATTACCAAACGTGATAACGGCTCTC
CTCGAAAAATCAGCTGATTTACTAAAAGCTATATCTCAATATATAAAAACGTTACAAGGA
TTAAACAACAATGATAAAATAGAAAACAAATTAGAAGATCTCCATATAAACGGGAAACAT
CACCTGTCAGATAGGATGTTGAAACTGATTGAAGCTTTCAAAACGGAGTTGCAGAACATT
TCGTCGAAGTTAGGACCAGATTGGAAGGATGTCGTCAATCAGATTTGGTCAGTAGGACCT
AGGAATTGCGGTCCAAATTTGCTTTTGAACCAAACAACGGATTATAAGACCAAGTTTTTG
CATCACGAAGATATTATTAAGGAAGATCCCAGGTTCGAATATGAGGGTAGTTTTGTCAGT
GGTTTCCAATTGGCTTCTTTGTCGGGACCACTGTGTGAAGAGCCGATGATGGGTGTTGCT
TTCTGTGTTGAAGAATGGACTCTAGAAAAGCCTGAAGAAGATTCTTCACATACTTTCGGA
CCCTTGTCAGGTCAAATAATGTCGACTGTAAAGGACGGTTGCAGAAAGGCATTCCAAGTG
CAGCCCCAGAGACTGATGGCAGCCATGTATTCCTGTGATATAGTTGTGGATCAAAAAGTA
TTGGGTGAGTTACATCCGTTAATCGTGACTTACATAATTATAATAACATTTTTCAAACTA
TTCAAAACAATTATTATTTTAATGGTCCTCAATCTTTTTAAAGGAAAAGTTATCGTAACA
ATGGTTGCTGTAATGATTTGGTATTAA
Protein sequence:
MRLVSSTKLLELQKKTSQIRNICIVAHVDHGKTTLADSLISSNGIISQRLSGKLRYMDSR
PDEQERGITMKSSSIALYHALEGEEHLVNLIDSPGHIDFSSEVSTAVRLCDGAIVVVDVV
EGVCPQTRLVLKQAYSENMKAVLVFNKIDRLIVEMKMTALDAYVHIAQLLEQVNAVMGEL
FASEVLENEETLIDKQQQKPNPKEDNNFYDWTSALEDSDDSNLYFSPEQGNVVFASAIDG
WGFTVHTFAKLFSDKLGVKEELLTKVLWGDFYLNPKTKRFMKGAQEKAKKPLFVQLVLDN
LWNIYETIVLRNDKDKVPSMCEKLGIKLTTRDLRHTDSRVQLQSLMMQWLPLSNTVLDMV
CRKLPSPKEILPEKVEKLMCSRIRDFESYSDETKELKKDFLACDSSNDRPVIVFISKMFS
IDKSMLPSNKPKALTPEEMALRRERARQMRDALKHSEKSEPIPVKTEELVENDKEKHATD
EQEKEDGDDTAFIAFARIFSGRIKKGDKLYVLGPKHDPSQVLMNKEFNIDPNKKLKDLQS
DEHITCAEIKSLYVLMGRELEDLEEAVAGNVIGIGGLEDHILKTATLSSTVACPSFSEIQ
YAAVPILRVAIEPTYPSQLPQLVKGLKLLNQSDSCVQVLLQESGEHVLVTAGEVHLQRCL
EDLKNLYAKIPITVSEPIVPFRETIVEPPKVDMANEEIDSQNIDKGNATDIDPVITVYTN
NKQSKIRIRAKPLPNVITALLEKSADLLKAISQYIKTLQGLNNNDKIENKLEDLHINGKH
HLSDRMLKLIEAFKTELQNISSKLGPDWKDVVNQIWSVGPRNCGPNLLLNQTTDYKTKFL
HHEDIIKEDPRFEYEGSFVSGFQLASLSGPLCEEPMMGVAFCVEEWTLEKPEEDSSHTFG
PLSGQIMSTVKDGCRKAFQVQPQRLMAAMYSCDIVVDQKVLGELHPLIVTYIIIITFFKL
FKTIIILMVLNLFKGKVIVTMVAVMIWY