| New model in OGS2.0 | DPOGS210531 |
|---|---|
| Genomic Position | scaffold7904:- 1391-4474 |
| See gene structure | |
| CDS Length | 1212 |
| Paired RNAseq reads | 19741 |
| Single RNAseq reads | 62867 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004165 (6e-53) |
| Best Drosophila hit | elongation factor 2b, isoform B (2e-142) |
| Best Human hit | elongation factor 2 (3e-104) |
| Best NR hit (blastp) | translation elongation factor 2 [Spodoptera exigua] (2e-159) |
| Best NR hit (blastx) | translation elongation factor 2 [Spodoptera exigua] (5e-155) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel IPR000795 Protein synthesis factor, GTP-binding |
| Orthology group | ND |
Nucleotide sequence:
ATGCGTTCCTGGTTGCCTGCCGGTGAAGCTTTACTTCAGATGATTGCCATTCACCTTCCA
TCACCTGTAGTGGCCCAGAAATACCGTATGGAGATGTTATATGAGGGTCCTCACGATGAT
GAAGCTGCTATGGGTATTAAGAACTGCGACCCCGAAGCACCTCTCATGATGTACGTGAGC
AAAATGGTGCCGACTTCCGACAAGGGACGTTTCTACGCGTTCGGACGTGTCTTCTCCGGT
AAAGTTGTGACTGGTCAGAAAGCTCGCATCATGGGCCCCAACTTCCAACCTGGCAAAAAA
GAGTTTACTATGTTTTTGTATACAGGTGTGTGTGTCCAAACTGAGACTGTGCTGCGTCAG
GCTATTGCTGAGCGCATCAAGCCCATTCTGTTCATGAACAAGATGGACCGAGCTCTTCTT
GAGCTGCAGCTGGAGGCCGAGGAGTTGTACCAGACTTTCCAGCGTATTGTTGAGAATGTC
AACGTCATTATTGCCACATACAATGACGACGGTGGTCCCATGGGTGAGGTCCGTGTGGAC
CCCAGCAAGGGCTCAGTAGGTTTTGGTTCCGGTCTTCATGGCTGGGCTTTCACCCTAAAA
CAGTTCTCAGAGATGTATGCCGATAAGTTCAAAATCGACCTTGTGAAACTCATGAACAGG
CTCTGGGGAGAAAACTTCTTCAATGCCAAGACAAAGAAATGGGCCAAGCAAAAGGATGCC
GACAACAAGCGTTCCTTCTGCATGTATGTTTTGGATCCCATCTACAAGGTGTTTGATGCT
ATAATGAATTTCCGTAAAGAGGAAATCGACGGCCTCCTCAAGAAGATTGGTGTCACTATC
AAGCATGAGGACTCGGACAAGGACGGAAAAGCTTTACTTAAGGTGGTGATGCGTTCCTGG
TTGCCTGCCGGTGAAGCTTTACTTCAGATGATTGCCATTCACCTTCCATCACCTGTAGTG
GCCCAGAAATACCGTATGGAGATGTTATATGAGGGTCCTCACGATGATGAAGCTGCTATG
GGTATTAAGAACTGCGACCCCGAAGCACCTCTCATGATGTACGTGAGCAAAATGGTGCCG
ACTTCCGACAAGGGACGTTTCTACGCGTTCGGACGTGTCTTCTCCGGTAAAGTTGTGACT
GGTCAGAAAGCTCGCATCATGGGCCCCAACTTCCAACCTGGCAAAAAAGAGCGCGCGTGT
TTCGGTCCCTAG
Protein sequence:
MRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAMGIKNCDPEAPLMMYVS
KMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKEFTMFLYTGVCVQTETVLRQ
AIAERIKPILFMNKMDRALLELQLEAEELYQTFQRIVENVNVIIATYNDDGGPMGEVRVD
PSKGSVGFGSGLHGWAFTLKQFSEMYADKFKIDLVKLMNRLWGENFFNAKTKKWAKQKDA
DNKRSFCMYVLDPIYKVFDAIMNFRKEEIDGLLKKIGVTIKHEDSDKDGKALLKVVMRSW
LPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAMGIKNCDPEAPLMMYVSKMVP
TSDKGRFYAFGRVFSGKVVTGQKARIMGPNFQPGKKERACFGP