| New model in OGS2.0 | DPOGS215576 |
|---|---|
| Genomic Position | scaffold392:+ 136231-142099 |
| See gene structure | |
| CDS Length | 1284 |
| Paired RNAseq reads | 73 |
| Single RNAseq reads | 172 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010978 (1e-42) |
| Best Drosophila hit | golden goal (3e-66) |
| Best Human hit | hemicentin-1 precursor (6e-07) |
| Best NR hit (blastp) | GJ11514 [Drosophila virilis] (2e-81) |
| Best NR hit (blastx) | AGAP002511-PA [Anopheles gambiae str. PEST] (2e-74) |
| GeneOntology terms | GO:0031290 retinal ganglion cell axon guidance GO:0007411 axon guidance GO:0030426 growth cone GO:0030424 axon GO:0016021 integral to membrane GO:0005886 plasma membrane GO:0004872 receptor activity |
| InterPro families | IPR000884 Thrombospondin, type 1 repeat |
| Orthology group | MCL13276 |
Nucleotide sequence:
ATGCGCCGCGAGCACATCGCCGCTCTCCTGCGGCTGCTTTTTATAGCAGGTGGTGCAAGT
TTTGTGAATCCATACGCAAACGAGGAGAGGGCGGAGGTAACAGACCTGAGCCAGGTATGG
GTGGAGATCCCCAGGAGTGTGGTCGCTCTGGGGGGAGATGTCCGTGTGTCAGTACACGGC
GTCAGAGACACCGGCGGCTTGAGGGTACGCCTCGCGCGAGAAGACGACGAAGATCGAACC
CTCCTCGCCACCATGCCACTAGCTTTAGACTCCGAGAGCCGCATGACACTACCGTGCGGC
TACTTCCCTAGAGGCGGCAGCTACTATCTAGAAATCGTAGCAGATAAGGAAACCGTCCTT
GACTATGACAACACCACTGTCAGAGTTAGGAGGGACTTAGGTCAAGGTGGAATTATGGAA
ACTGGAGATAGTGTGGTGAAGTCCTGGAAATTTGACGTCCTGTGGCCTAGCGCTAACCTG
GACGTGACCCCAGAACAGATTCAAACATACCCGGAGAGACAGGTGACGGCGATCCTAGAG
TTTCCGAAGGTAGTTTGTACACCCTTGGAAGATGGCGCGGACTTTTGGTTGGAACTATTG
TATTGTGGACACTCGAGCGGAGGCGCAGTGCTTTGTGATGGGAAGAATAGTAGCTCCCAT
GCTCACGTCCTGTATTCAGAACAGATGCATGGCTTCCCCGGTCGACGTACAATGACACTC
AGGTGCGAACTATTCGGTCAAGCGGGGGACTACGCCCTCACTCTGAGACCAGCTGCCTCT
GCGGGTCCGCAAGACTTGGCGGTGGCTTTTGTTAAGGCGGATTGGTCAGAGCAGTTCGTG
TTGAACGTTCACGGAGGGTCAGTGTTCCCGTGCGGTGATGGAGTCAGGGTGTTGTTCCAA
TACCCCGAGTGTGTGCTGGAGGGGGCGGACCGAGTGCGAGTGTTCGGACGAGAAGCGGAA
AGATTAAGATACGTCGCCGAGAGGAGAGTCAGGAGAGGTCAACACACAGCTTCCTTCGAT
TGTAGACTGTTCAGTGAACGTTATCCAGAGTACTGTTTCGTGTACGTCTCCCAGGCGGTT
ACCGGCGCGGTCGCTGATGTTAGGATGGATTGTTTACCCACACTACCACTATCAGATGGC
GGCGCTGGAGGATGGGGTGAGTGGTCTCCATGGTCGGCCTGCCCGGCACCAGCTCAGTGC
TCGACCCGCACGAGGAGCAGACACCGCTTCTGTGATTCACCGCCGCCCGCGTACGGAGCC
AAGTTCTGTGAGGTATATAAATGA
Protein sequence:
MRREHIAALLRLLFIAGGASFVNPYANEERAEVTDLSQVWVEIPRSVVALGGDVRVSVHG
VRDTGGLRVRLAREDDEDRTLLATMPLALDSESRMTLPCGYFPRGGSYYLEIVADKETVL
DYDNTTVRVRRDLGQGGIMETGDSVVKSWKFDVLWPSANLDVTPEQIQTYPERQVTAILE
FPKVVCTPLEDGADFWLELLYCGHSSGGAVLCDGKNSSSHAHVLYSEQMHGFPGRRTMTL
RCELFGQAGDYALTLRPAASAGPQDLAVAFVKADWSEQFVLNVHGGSVFPCGDGVRVLFQ
YPECVLEGADRVRVFGREAERLRYVAERRVRRGQHTASFDCRLFSERYPEYCFVYVSQAV
TGAVADVRMDCLPTLPLSDGGAGGWGEWSPWSACPAPAQCSTRTRSRHRFCDSPPPAYGA
KFCEVYK