| New model in OGS2.0 | DPOGS215576 |
|---|---|
| Genomic Position | scaffold392:+ 142412-154106 |
| See gene structure | |
| CDS Length | 4107 |
| Paired RNAseq reads | 237 |
| Single RNAseq reads | 597 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010978 (8e-77) |
| Best Drosophila hit | CG17122 (5e-39) |
| Best Human hit | hypothetical protein LOC286207 (1e-16) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC005237 [Tribolium castaneum] (4e-97) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC005237 [Tribolium castaneum] (1e-88) |
| GeneOntology terms | GO:0031290 retinal ganglion cell axon guidance GO:0007411 axon guidance GO:0030426 growth cone GO:0030424 axon GO:0016021 integral to membrane GO:0005886 plasma membrane GO:0004872 receptor activity |
| InterPro families | ND |
| Orthology group | MCL16858 |
Nucleotide sequence:
ATGGCGCCTAAAAAAGATAAAGGGAAAGAAGAGGATGGGAAACATAAAGGAGGAGGAGGT
ACTTTTACAGAAGTTGAGAAAACTTTCTTAGAGCTTCAGGTAACAGAGTGTAATCGAAAA
ATAGCAAGACTTAGAAGCGCTGTTGATGACTATGAACAAAAAAATGAAGAACTACAAAAA
GCATACGATAAACTTGACGAAGACAGGGCAGATATTATAGCATATTTGAAAAAAACTCTT
AATCTAAAGAATGAGGAAAATAGTGAGTTAAAAGAAAAAGTCAAGGGATTAGAAGAGACT
AGAGAAATAGAAACTGCACAGTTTAAAGAAACAGTTGCAGATTTGGAAAAGAACTTTACA
ATAATGAAAGACCAATTGACTTCTGAAAACAAACTACTTGCGGGTAAATTAAATACCTTA
GAAGAATTCAGAGCTATAAGGGATGATCTTATGAGAAAGTTTGATAACCAAGAACAAGCA
TTTAAAGACCAAGAAATGAAATATAAAAGAATTATTTATGATGCTGAAAAGAAATTTGTC
ATAGGAAAGGACAAATTGAAAAAAGAAATGGAGGCGCGCTTATTACAACTTGCTCAAGAC
TTCCAGGATGCGACAGAGTTACGTATAGCTGCATCCACTCATAGAGTGATTCGAGAGAAC
ATTGCTATCAATAATGAGTTGGATAGTATTTTATCAACACAAGCTAAATTAGCTGACCAA
AATGAGAAATATAAAGAGAGTGAAAGAGCTGCACGGGTCGCTTTAGAGTTAGCAGAGGAA
GAAAGAGATAAAGCTATCAATAAAAATGTTATTCAACTCAAAGTCATTGACCAATTGACA
ACAGCATTCCAGGATATTAAAAAAGAAAAAGGAATTTATGACAAACGTATCTTGGATTTT
GAAACTCTTCAAGTTAAAGTTCAAAAACTTGTAAAAGAAAATGAAAATTTGTCGCTACAA
GTACGCATATTGGAACAAAACTTGCATGTTCGTATGAATGATCAAAATAAGGCTTCTGTA
GAAGCGTCAAAAGTTTTTAAAGAATGTGCCAGACTAAAACGTATACTTAAAGAAGCTGCA
ATTGCCGTGCAGGCAGCACTAAAACTGGATGATTGGGCTACTAGTGATCCTACTAAGGAA
GTTATGGATAGACATGTCTTACTTTCGCGTTTGCTTTCTATTCTAGCCCAGTATCGAGAA
ATGCAACGAACAGAATCTCTAGAAACTTTAGCCTCATTCAGTAAAATATACGAGGAAGGA
GACCTCGGTTTTATACCAAAACCGCTCCAAAGAAAGTCTATAATTTCTGCTACTGTGTCT
TTAACCTCTAAAGAATCTTCCAAATCAGATCAAGGGACATCAGAAATTTCACTTGTCTCG
TCATCACTTGGAAGTGTTAAGACTATTCCTAGTATAAAACTCATTCCACCTTCAACAGAA
CCCCCACCTCCAGAAAAAGAAAGTTTGCAATCCTTTGTAACCTCGACTAAATCTACTATA
AGCGGCAGTGAAGAAGAATTAGAGGAAACACCTGAAAGTGAAATGAATATAGAACAAAAA
TTAGAAGCTAGTAAACTTGAGATTCAAAAATCAATACTTAAAGATCTACAATATTCACAA
ATGATATCGCAATCTCAGCTGGCAAGTGATTTGAAACATGGATCTAAATCAGTCATAATT
GAAGAACCAGTTGAAGAGGCAGAAGAAGCAGACGGAGAAGAAAAGACAAAGAAAGAAGAA
GAAGCAGTTGGAGAAGAGGAAGGAAAACACGAGGCGGGTGAAGAGACAGCAGAAATAAAA
TCAGAAAAGAGTGTTTTATCGAATCAGGGTCAGGCGGTAGAGCTGGCGGCTTGCGAGTGT
TTGGCGCGTCCCTGGGCTGGAGACTCGTCGGTTGTGGTGGCGGAGGTGGGCGAGCGATGT
CGCTGTGGTTGCGTGCTTCACCTGGCGCCCGCCGCGCGTCTCCTGGCTGGATCAGCCCGA
GCCTGCCCCGCTAGGTCCTTTTGGTTGCTGCAGGCAGAAGAAGGTTTGGCCGTGAGAGTC
AGTTTCGAGTCTGTAAAGCTCCCGTGCAGCGGCCAGGCTCTGAGAGCGAGGGATGGAGAC
TCCCTGGGCTCGCCTCTCTTGGCCTCGTGGGACGGCCCGGACACCTCAGCTGTGGTTGAA
GAGTACGAGACTACCACCACCAGCGGTGTGGTGGAGGTAGTAGGTGGTAGACACGTTCTG
GTGGAGCTGCGTTCAGGGGACCCGGGAGATGGGGGGGACCTGTGTGCCGGAGGGTTCCTC
GCACACGCTACACAGATAGAGCCGATCCGTAACGCGTCGGCTGCTCGGTCTCCCCTGAGG
TCCTGGTGGGCTGGCGGCGGTGCTGCACGAGCGGCGGCCGCGGCACTGGCTGCGGCGGCG
GCTCTCGCTGCCTTACTGCTGGCCGCCCACTCCGCGCATCGCACACGCGCTTACCAGCGA
GCCGCTGATAAGGAATCACTCACCGATAGTGACGCATGTTCTCTGTCCCTGGAGCTGTGT
GCGAGTGCGTCACGTAGCACTCTAATGTCGGAGGCTGGCGGGGCATCTCTACGACGTCTG
TTGCCTACCTCAAGGGAGAAGGGTCGCGGAGAGGCACTCAGGTTCGTCCTGGATTTGTAC
GCGGTAGAAGTGGGAACGAGAGATATAACGGCAAAATCTCTCTACGACGTACTAAAAGAC
ATGGGCCTGTCCAGAAATAAGATCAATTCAGTCTTGGAACGTACTTCGAAGGCAGCTCTA
GTAGAGAGAGGAGTTTGGACGGTAGAGGTGAGCGCGTTACATAAGGATCCCTTAAACTTT
CACTTGGGTCGCAAATTCCCGGCACTGTCGAAGCTCCTCTCCATGCAACGTTTTGGATCC
GGCAACCGCATGGTGAATCCATTGAATGCTAAGAGGGATGAAGAAGACCAGACATCAGAT
GCAGAGGTCGAGGGTGACAATGTGAGTGTTGGCAGCGCCATCAGTGCGACCAGTCAGGCG
ACCATCACGCCAGAGAACGTGTCGTCTAGCAGCGCCCCGGCTGGCCCTCCCCCGGATACA
CAGCATGCCACTACGTCTCTGAGACGATCTCGTACCGTGTCCTCTAACAACGTTCAAGTT
GCCAGCATGTCATTACCTCAAGAACCTTCAACGAGTCAACTGACTGCGGAGAGTACGAGC
ATCACCAGCATAAGTGAGAGGGATAGCTGCAGCGAAAAAGACAAAAACAGTGCGTGGGAC
AAGGATAGAAGTGTTAGCAGAGCTTCATCTTCCACTTCTGCTGCCACTCTTACTAATGGT
TGGTACTCCCCTGCCCTGAGCGGCGTATCATCAGCTCGAGTGCGTGACAACCCTAGCCGC
AACCAGCACGCGACTGCCTCCAACCCTGGTTCTAAAGCCAGCAAGGACTGTCGTAACCGC
CGTCTCCTCCGCTCTGACCTCAGCCTCGCCTCACACGCTGAAATGGAAATAGACTACTAC
GACTATGAGGTCAACAATGCTGGCTCTTACTTAGGAATGGATCCAGCATTCCTAGTTTGG
ATTCCACCTTTAGATGAAGGAGACATAATTAAGGAGATTGACGACAATATGCCTATATAT
GAGGAAATTCTACCTAAGGAATTGCACCCGGATCCGGGAAGCAATACGGAATCACCAGAT
GAAGGACCTGCATTAAGTACTTTGAAGAGTAACTCAGACAATAGATCGAACAAATCAAAC
GAATCAGCAAAATCGGTCCGAAAACACGAAAGAGGCAACATCATTCACCCCTTAAACTTC
AGCATAAGCGATCTGCAAAATGCACCAAAACTCGCTAAAATTAATAAAAAGAAAAAAGAT
GATGTCTTCATTCCAATGAGAGATCTCACTCTCACTATGTCACCGGTGAAAGTTCACAGA
AGAGAAAAAAAATCTGAATACGATAATTCATCGACGCTCAAAAGAGTCAATGACTCCAGA
GAAAAAGACGACACTCTGAAACGAACAACGAACTTCAATGACATCAAGTTTGCGGATGAA
AATTCTGATTCATCCAACGAAATACAGTTCGCGGACGAGTCTCCAGACAGCAACAGATTG
GCTGACAAATACGGAGTAAGAGCATAA
Protein sequence:
MAPKKDKGKEEDGKHKGGGGTFTEVEKTFLELQVTECNRKIARLRSAVDDYEQKNEELQK
AYDKLDEDRADIIAYLKKTLNLKNEENSELKEKVKGLEETREIETAQFKETVADLEKNFT
IMKDQLTSENKLLAGKLNTLEEFRAIRDDLMRKFDNQEQAFKDQEMKYKRIIYDAEKKFV
IGKDKLKKEMEARLLQLAQDFQDATELRIAASTHRVIRENIAINNELDSILSTQAKLADQ
NEKYKESERAARVALELAEEERDKAINKNVIQLKVIDQLTTAFQDIKKEKGIYDKRILDF
ETLQVKVQKLVKENENLSLQVRILEQNLHVRMNDQNKASVEASKVFKECARLKRILKEAA
IAVQAALKLDDWATSDPTKEVMDRHVLLSRLLSILAQYREMQRTESLETLASFSKIYEEG
DLGFIPKPLQRKSIISATVSLTSKESSKSDQGTSEISLVSSSLGSVKTIPSIKLIPPSTE
PPPPEKESLQSFVTSTKSTISGSEEELEETPESEMNIEQKLEASKLEIQKSILKDLQYSQ
MISQSQLASDLKHGSKSVIIEEPVEEAEEADGEEKTKKEEEAVGEEEGKHEAGEETAEIK
SEKSVLSNQGQAVELAACECLARPWAGDSSVVVAEVGERCRCGCVLHLAPAARLLAGSAR
ACPARSFWLLQAEEGLAVRVSFESVKLPCSGQALRARDGDSLGSPLLASWDGPDTSAVVE
EYETTTTSGVVEVVGGRHVLVELRSGDPGDGGDLCAGGFLAHATQIEPIRNASAARSPLR
SWWAGGGAARAAAAALAAAAALAALLLAAHSAHRTRAYQRAADKESLTDSDACSLSLELC
ASASRSTLMSEAGGASLRRLLPTSREKGRGEALRFVLDLYAVEVGTRDITAKSLYDVLKD
MGLSRNKINSVLERTSKAALVERGVWTVEVSALHKDPLNFHLGRKFPALSKLLSMQRFGS
GNRMVNPLNAKRDEEDQTSDAEVEGDNVSVGSAISATSQATITPENVSSSSAPAGPPPDT
QHATTSLRRSRTVSSNNVQVASMSLPQEPSTSQLTAESTSITSISERDSCSEKDKNSAWD
KDRSVSRASSSTSAATLTNGWYSPALSGVSSARVRDNPSRNQHATASNPGSKASKDCRNR
RLLRSDLSLASHAEMEIDYYDYEVNNAGSYLGMDPAFLVWIPPLDEGDIIKEIDDNMPIY
EEILPKELHPDPGSNTESPDEGPALSTLKSNSDNRSNKSNESAKSVRKHERGNIIHPLNF
SISDLQNAPKLAKINKKKKDDVFIPMRDLTLTMSPVKVHRREKKSEYDNSSTLKRVNDSR
EKDDTLKRTTNFNDIKFADENSDSSNEIQFADESPDSNRLADKYGVRA