| New model in OGS2.0 | DPOGS209803 |
|---|---|
| Genomic Position | scaffold1566:+ 31164-40231 |
| See gene structure | |
| CDS Length | 1893 |
| Paired RNAseq reads | 114 |
| Single RNAseq reads | 280 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008027 (1e-136) |
| Best Drosophila hit | CG5549 (2e-114) |
| Best Human hit | sodium- and chloride-dependent glycine transporter 1 isoform 2 (1e-105) |
| Best NR hit (blastp) | PREDICTED: similar to IP14091p [Tribolium castaneum] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to IP14091p [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0015375 glycine:sodium symporter activity GO:0005887 integral to plasma membrane GO:0005328 neurotransmitter:sodium symporter activity GO:0006836 neurotransmitter transport GO:0005326 neurotransmitter transporter activity |
| InterPro families | IPR000175 Sodium:neurotransmitter symporter |
| Orthology group | MCL19013 |
Nucleotide sequence:
ATGCAGGAAAACGGTAATGCCGTGGCTAGTGGCGATGACAATACTGAAACAGCGCAGCGA
GCTTCTTGGGGTCGACCTCTGGAATTCATATTGGCATGTCTGGGATACGCTGTCGGGCTT
GGAAATGTGTGGCGATTCCCTTATCTATGTTACAGGAATGGAGGAGGTGCTTTCCTGATA
CCATTCTTTCTGATGCTTATTCTCGTTGGACTTCCAATATTTTATCTGGAACTGTACATT
GGTCAATTCACTGCATTAGGACCTCTTAAAGCTTTTAATGCTATCAGTCCATTCTTCACT
GGACTTGGCTACTGTACTTTAATGGTTATTTCGATGATATCAATATATTACATGATCATT
GTAGCATGGACAATTTTCTACACTTTCATGTCGATAGGCGGCGATTTAGGATGGGGGTCG
TGTGAAAATGATTATAATTCTCTATATTGTTACAGTGGCGCGTATGACAGTGAATGTAGA
GTTAATAACACAGGAAACTACACGGATTTAACATACTATTTACAAAAATGTATCAGTATT
GGAGAGATTTGTCAGCTTACGGGGTTCGAGCCATATGACGGTTCTAGTTGCTGGACGGGA
AATGAAACTATCCCGTGGTATAGAAATGTGAATAGGACTTTGGCCTCAGAAGAATATTAC
AACGAACGTGTCCTTGGAAGAGGTGATTCCACTTGGGAAAACTGGGGAAGTATACAGTGG
CACTTAGTTGGATGTCTATTTTTCTGTTGGGTAGTAGCATTCTTATGTGTCATTAAGGGA
GTGCAGTCAGCAGGAAAAGTTGTGTATTTCACGGCGTTGTTCCCGTATGTAATGCTGACA
GCTCTTCTTATAAGGGGTGTAACATTGGATGGAGCCGGAGAAGGCATCTTGTTTTATCTA
ACACCGAAGTGGGAAACACTTTTAGAAGCTCGTGTCTGGGGCGACGCAGCTTCACAGATA
TTTTATTCATTCGGCGTTGCTTGTGGCTCTCTGGTGACTTTGGCATCTTATAATAACTTT
CACAATAACTGTCACTTCGATGCAGTGTTTGTCAGCTTAACAAACTTTATGACTTCGATA
TACGCTGGGTTTGCAATCTTCTCTGTTTTGGGATTTCAAGCAGAGCTCATGGGTGTTGGA
GTCGATGATGTAGCGGAGCAAGGTCCTGGGCTAGCATTTGTTGTCTATCCCGAAGCCCTC
CTACAAATGCCTATACCTCGACTATGGTGTATCCTATTTTTCTTCATGATGTTCATATTG
GGATTAGGAAGTCAGTTCGCTGGTATCGAGGCTATAAATACAGCCATAGTCGATCGCTGG
CCACAATTTCGGAATCGTTATTGGATGGTAACTGCATTCACGTGCTTCACGTGTTTTATT
CTCGGTCTTCCAATGTGTTTCAGTGGCGGAGTATATCTATTTACATTGCTCGATTGGAAC
ACCGCATCCTGGGCTATATTACTTATAGGTTTAGCTGAGTGTACCGCCGTATCTTGGTGC
TACGGCATCAACCGAGCGATGCGAGACTTAGCTTCTATGGATATGAAGTTAAATGTGGTG
ATACAATTTTATTGGAAATTTGTGTGGATGATCAGTGTGCCAGTTGTTAGTTTAGGTATA
TTAATATTTTTGTTCATCGAATGGCAACCGCCGTCTTACGAAGGCTACGAATTTCCTCTC
TACGCTGATCTTCTCGGATGGGGGATTGGTCTGTCTACACTGATGTTTTTCCCAGTTGGA
GTTTGTTGGGCATTATACAAAGGATATAGAGGCAAGGAACTATTTCAACCAACAGAAGTT
TGGAAACCGGCAGTGAAGCTATCAGATCAGTCACCTGACCCTAGACGGAATCCAAGACCC
TCAGAATATGATAATCTCGGTTATATGATGTAA
Protein sequence:
MQENGNAVASGDDNTETAQRASWGRPLEFILACLGYAVGLGNVWRFPYLCYRNGGGAFLI
PFFLMLILVGLPIFYLELYIGQFTALGPLKAFNAISPFFTGLGYCTLMVISMISIYYMII
VAWTIFYTFMSIGGDLGWGSCENDYNSLYCYSGAYDSECRVNNTGNYTDLTYYLQKCISI
GEICQLTGFEPYDGSSCWTGNETIPWYRNVNRTLASEEYYNERVLGRGDSTWENWGSIQW
HLVGCLFFCWVVAFLCVIKGVQSAGKVVYFTALFPYVMLTALLIRGVTLDGAGEGILFYL
TPKWETLLEARVWGDAASQIFYSFGVACGSLVTLASYNNFHNNCHFDAVFVSLTNFMTSI
YAGFAIFSVLGFQAELMGVGVDDVAEQGPGLAFVVYPEALLQMPIPRLWCILFFFMMFIL
GLGSQFAGIEAINTAIVDRWPQFRNRYWMVTAFTCFTCFILGLPMCFSGGVYLFTLLDWN
TASWAILLIGLAECTAVSWCYGINRAMRDLASMDMKLNVVIQFYWKFVWMISVPVVSLGI
LIFLFIEWQPPSYEGYEFPLYADLLGWGIGLSTLMFFPVGVCWALYKGYRGKELFQPTEV
WKPAVKLSDQSPDPRRNPRPSEYDNLGYMM