New model in OGS2.0 | DPOGS212518  |
---|---|
Genomic Position | scaffold5765:+ 5138-5524 |
See gene structure | |
CDS Length | 387 |
Paired RNAseq reads   | 1970 |
Single RNAseq reads   | 8274 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009649 (2e-33) |
Best Drosophila hit   | histone H2A (6e-31) |
Best Human hit | histone H2A.x (9e-30) |
Best NR hit (blastp)   | hypothetical protein BRAFLDRAFT_129443 [Branchiostoma floridae] (9e-44) |
Best NR hit (blastx)   | AGAP003913-PA [Anopheles gambiae str. PEST] (5e-29) |
GeneOntology terms    | GO:0000786 nucleosome GO:0006333 chromatin assembly or disassembly GO:0003677 DNA binding |
InterPro families    | IPR002119 Histone H2A IPR007125 Histone core IPR009072 Histone-fold |
Orthology group | MCL22684 |
Nucleotide sequence:
ATGTCTTCCAAAAAGAAGAGCAAGTCGCGGTCATCTCGAGCCGGTCTCCACTTCCCCGTC
GGAAGAATCCACAAGATCCTAAGGAAAGGTAACTACGCGCCCAGGATCGGAGCTGGAGCG
CCTGTCTACTTGGCAGCAGCCCTGGAATACTTATCAGCTGAAATACTGGAGCTGGCGACG
GAAGTGGCTAAGGAGAACAACAAGACGAGAGTCATCCCCCGACACATACTGTTCGCCATC
AAGAACGACGAGGAGCTCAACAGAATGCTGTCCGGAGTGACCATCTCTCAGGGCGGCGTG
CTGCCCGCTATACACGCGCAGCTGCTGCCCAAGAAGACGGTCAAGAACACGCAGCCGTCA
CAGTCACAATCATCACAGTCATATTAA
Protein sequence:
MSSKKKSKSRSSRAGLHFPVGRIHKILRKGNYAPRIGAGAPVYLAAALEYLSAEILELAT
EVAKENNKTRVIPRHILFAIKNDEELNRMLSGVTISQGGVLPAIHAQLLPKKTVKNTQPS
QSQSSQSY