| New model in OGS2.0 | DPOGS200455 DPOGS200454 |
|---|---|
| Genomic Position | scaffold9545:- 3110-4067 |
| See gene structure | |
| CDS Length | 276 |
| Paired RNAseq reads | 1 |
| Single RNAseq reads | 227 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011186 (4e-21) |
| Best Drosophila hit | Snx6 (5e-12) |
| Best Human hit | sorting nexin-6 isoform b (4e-10) |
| Best NR hit (blastp) | PREDICTED: similar to sorting nexin [Nasonia vitripennis] (1e-17) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC000458 [Tribolium castaneum] (8e-14) |
| GeneOntology terms | GO:0006886 intracellular protein transport GO:0007154 cell communication GO:0005515 protein binding GO:0035091 phosphoinositide binding |
| InterPro families | IPR015404 Vps5 C-terminal |
| Orthology group | ND |
Nucleotide sequence:
ATGCGCCCCGCACTCGTGCGACTTGTAACACTGTGTTTTTTTCTGTGCACCCAGCCTATG
GAAGTACAAGAGGCGGAACAGGCCCAAGCGGACGCCTGCGCTCGTTTCGAACAGCTATCA
GCTCGCGCCAGGGAGGAGCTGATAGACTTCAGGACACGAAGAGTTGCGGCTTTCAAGAAA
AGTTTAATAGATCTGGCGGAGCTGGAGATCAAGCACGCTCGGGCGCAGCAGGAGTTGTTC
AGGAAGTCGTTACAAGTATTGAGGGAATGCCAGTAA
Protein sequence:
MRPALVRLVTLCFFLCTQPMEVQEAEQAQADACARFEQLSARAREELIDFRTRRVAAFKK
SLIDLAELEIKHARAQQELFRKSLQVLRECQ