| New model in OGS2.0 | DPOGS201326 |
|---|---|
| Genomic Position | scaffold1286:+ 71437-81643 |
| See gene structure | |
| CDS Length | 2421 |
| Paired RNAseq reads | 1280 |
| Single RNAseq reads | 3618 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003119 (7e-117) |
| Best Drosophila hit | quail, isoform A (6e-54) |
| Best Human hit | advillin (2e-61) |
| Best NR hit (blastp) | PREDICTED: similar to villin [Tribolium castaneum] (1e-147) |
| Best NR hit (blastx) | PREDICTED: similar to villin [Tribolium castaneum] (3e-131) |
| GeneOntology terms | GO:0003779 actin binding GO:0007010 cytoskeleton organization GO:0005575 cellular_component |
| InterPro families | IPR007123 Gelsolin domain IPR003128 Villin headpiece IPR007122 Gelsolin |
| Orthology group | MCL10200 |
Nucleotide sequence:
ATGCATATCCTGGAGATAGGCGCTGAACAAGATGAGGAGGTCACCGGACGGGCCCACGAA
GCTGCTTTCCGAACCGTCCCCAAGGATTACACAACCTTCTTAATCTGGAGGATAACTGAA
TCTGGTACTGAACTACTGCCGAGGTCGCACTACGGTACATTCTATGATACCGACGCGTAC
TTGGTGTATTCGTGCTCGCTGCCAGGTCAGCCGGCGGAACCGGATATAATTCGTCGCGAA
ATAAGAGAGAATGGAACAGAGTATGCTGAACGGCACGTCCACGCGTGGGCGAGTGAGACA
CAGGCGGGGACGTTGGTGCTGCGACGAGCGAGCCAACTGCTGGCTCACCTCGCCGCACCC
CTCGTACTGCACAGGGAAACTGCCACGAAGGAGTCGCCGAGGATGCTCTCTTATTTCCGA
GATGGCATCAGAATTCTTCGTAGTGGCTGCTTGAACGGCGGTCCTCGTTTATACCGAGTT
CAAGGTCATCGACCGGTGATGCTTCAGCTGGAGCCGGTCACGTGGGCCCAGCTCGCCTCT
GATGGTGTTTTCGTGCTGGACACCACCAATTTGATAGTTCTATGGCTTGGCCGTGCAGCC
AATTTAATTGAAAAAATCTTTGGAGCGAAGATCGCATACCGTATGGCTCGTGGAGTAGAA
AAGGGAATGATGGCACGGCGCATCGCTATCGCTCACGATGGCTACGAGCAAACACTACCA
GTCGCGGATCGAGAATTCTTGAACAACATCTTAGAACTACGGTCAAGAACCATCCGTCCG
TCACCAGTGGTCTCCGAAGCCCCGCGACCCGCCCGTCTATTTAAAGTGACGCAGCCGCCG
CGAGTGTCGCCTGTCACCGTGCCTTCTCAAAGAGCGGCAGCTCGCCTCGAGGAAATCAAA
AGAGCTCCGCTATACCGACAGGATTTAAAGGACGACGGTGTGTATATAGTCGAAGCTGGT
TCGCGGGGAGTGTGGGCATGGGTGGGTGCGCAGGCGGGCTCTGCAGCAGGTCGCGGGGCG
CTGGCCGCGGCGCGAGGACTGGCACGTGCCAAACGACTGAGCGGACCTGTTGCCACCATG
CTATCAGGTCGAGAGCCTTTGGAATTTGCGGCGCTCTTCCACCGCTGGAGTTGGGCGGAT
TCACGCCGCGACATACGCGTGAGGGCCGCACGATCTGCCACAACCAAATTGGATGCTGTC
AGTCTAGCTTCGAATTCCTGGCTGGCTGCCGAGGCACAACTTCCAGACGATGGTTCGGGG
TCGCTAAGAATGTGGCGTATTCGGTGCGAAGGTGAAGGACCGATGCAAGAGTTAGAGCGT
CCACAGCATGCAGCTTTTTATGATCAAGACTGCTACATCATACTTTATACATACCATGCC
CCTATTGGAGACCAGACGATGCTCTATTATTGGATGGGTGGCTCTTCGCCAAATGAACTA
CGGAATTTGGGCGCAAAAGAAGCCAAAGACCTCTATACAAAGCTAGGTCGTCTTCCTATA
CAAGCGTGGGTTTACCAAGGCAAAGAGCCTGCACATTTCTTACAAATTTTCAAAGGACGG
ATGATAACCTACAAAGGAACTGCCACAGATTATGATCCCAGTGGTCGTAGAGTAGTCCCT
CCTCCGCGAACACTCATCCGTGTGTCTGGTCAATATGCACGCGAGGCTCGAGGTGTGGAA
GTATCAGATGAAATTGTTTCGGGAGGTGCAGGGCTAGCGGGGGTCGCGAAGAGGGGCTCG
TGCTACGTGATGCGGGAGGGCACACGGGTGTGGGTCTGGTGCGCCGCCACCGCTACTGGT
GACGAACGCGAGGTCGCCAAGAACATGGCCGCTGCGGACCATACATTAATCATGCAAGTC
GAGGAGATCATCTCAGTGTCTCAATATGAGCTAGCTCCGGAGATGGCGGGTGTGTTGGAC
GCCCACGCCGCCTTGTTCGTGTGGCTCGGCGCCCACTGCGCTCACCGCGCTAGGGAGGAC
GCCAGACAACTTGCACTATCGTATCTAGCGCAGGATCCAGCAGCGAGAGACGCCGAAACT
CCTATCATAGTTGTCCATCAAGGTCGTGAGCCTCCACATTTCACTGGATTCTTTCCCCAC
TGGAAGAACTCTATGTGGAAGGGTCACAAAACCTTTAGCGCGATAGTAAGCGCGTTGGAA
GGTAAGGCGATCGTTCGCGGAGGCAACAGTAAACTTCAGAGCGGTAATAGTGAGAACCGA
TTCGACCAGCACGAGAAATATCCGTTGTCGGTACTGCGAGGACCCAAAGAACATCTCCCG
CAAGACGTCGACCCGCTCACTAAAGAGCTGTATCTTACGCACGACGATTTCGTATCCACC
TTCAACATGACGTACAATGACTTCCGATCGTTGACCGCCTGGAAACAGAGGGAGCTGAAA
AAGTCTGCGGGTTTATTCTAA
Protein sequence:
MHILEIGAEQDEEVTGRAHEAAFRTVPKDYTTFLIWRITESGTELLPRSHYGTFYDTDAY
LVYSCSLPGQPAEPDIIRREIRENGTEYAERHVHAWASETQAGTLVLRRASQLLAHLAAP
LVLHRETATKESPRMLSYFRDGIRILRSGCLNGGPRLYRVQGHRPVMLQLEPVTWAQLAS
DGVFVLDTTNLIVLWLGRAANLIEKIFGAKIAYRMARGVEKGMMARRIAIAHDGYEQTLP
VADREFLNNILELRSRTIRPSPVVSEAPRPARLFKVTQPPRVSPVTVPSQRAAARLEEIK
RAPLYRQDLKDDGVYIVEAGSRGVWAWVGAQAGSAAGRGALAAARGLARAKRLSGPVATM
LSGREPLEFAALFHRWSWADSRRDIRVRAARSATTKLDAVSLASNSWLAAEAQLPDDGSG
SLRMWRIRCEGEGPMQELERPQHAAFYDQDCYIILYTYHAPIGDQTMLYYWMGGSSPNEL
RNLGAKEAKDLYTKLGRLPIQAWVYQGKEPAHFLQIFKGRMITYKGTATDYDPSGRRVVP
PPRTLIRVSGQYAREARGVEVSDEIVSGGAGLAGVAKRGSCYVMREGTRVWVWCAATATG
DEREVAKNMAAADHTLIMQVEEIISVSQYELAPEMAGVLDAHAALFVWLGAHCAHRARED
ARQLALSYLAQDPAARDAETPIIVVHQGREPPHFTGFFPHWKNSMWKGHKTFSAIVSALE
GKAIVRGGNSKLQSGNSENRFDQHEKYPLSVLRGPKEHLPQDVDPLTKELYLTHDDFVST
FNMTYNDFRSLTAWKQRELKKSAGLF