| New model in OGS2.0 | DPOGS203115 |
|---|---|
| Genomic Position | scaffold299:- 29815-31233 |
| See gene structure | |
| CDS Length | 1419 |
| Paired RNAseq reads | 1323 |
| Single RNAseq reads | 3481 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001525 (7e-58) |
| Best Drosophila hit | Tyrosyl-tRNA synthetase (3e-174) |
| Best Human hit | tyrosyl-tRNA synthetase, cytoplasmic (9e-164) |
| Best NR hit (blastp) | tyrosyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus corporis] (0.0) |
| Best NR hit (blastx) | tyrosyl-tRNA synthetase, cytoplasmic, putative [Pediculus humanus corporis] (0.0) |
| GeneOntology terms | GO:0016874 ligase activity GO:0005634 nucleus GO:0000049 tRNA binding GO:0000166 nucleotide binding GO:0004831 tyrosine-tRNA ligase activity GO:0005524 ATP binding GO:0006437 tyrosyl-tRNA aminoacylation GO:0005515 protein binding GO:0005737 cytoplasm |
| InterPro families | IPR002307 Tyrosyl-tRNA synthetase, class Ib IPR002547 tRNA-binding domain IPR016027 Nucleic acid-binding, OB-fold-like IPR002305 Aminoacyl-tRNA synthetase, class Ib IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR012340 Nucleic acid-binding, OB-fold |
| Orthology group | MCL14093 |
Nucleotide sequence:
ATGTCTAAGATTGCTGATTTTCTAAATGCAGGGTGTGAGGTAACAATTTTATTTGCTGAC
TTACATGCCTATTTAGATAACATGAAAGCACCATGGGAGTTATTATCCTTGCGAACACAA
TACTATGAAGCAGCAATCAAAGCTATGTTAACTTCCATAAATGTTCCCCTAGACAAACTA
AAATTTGTTAGAGGTACAGAATATCAGCTAAGCAAAGAATACACATTGGATGTATACCGC
ATGTCATCTGTTATAACAGATCATGATGCAAGAAAAGCTGGTGCAGAGGTTGTAAAACAA
GTTGAGCATCCATTACTAAGTGGTCTCTTGTATCCTGGCTTGCAAGCATTGGATGAAGAG
TATTTAAAGGTTGATGCACAATTTGGTGGTGTTGACCAGAGAAAAATATTCACAATGTCT
GAGAAGTATCTACCTCAGCTGGGCTATGCCAAAAGGGTGCACCTTATGAATCCAATGGTA
CCAGGTCTGACAGGTGGTAAAATGTCTGCTTCAGAAGAGGACAGTAAGATAGACTTATTG
GACAATCCAGCAAATGTTAAGAAAAAGCTTAAGAAAGCTTTCTGTGAACCAGGCAACATT
ACTGAAAATGGTGTCCTGTCATTTACTAAACATGTTGTGTTTCCGTTAATGAAAGCTGGT
GAAACATTCAAAATTTATAGAGCTGAAGAGCATGGTGGCAATGCCGAGTATGATAATTTT
GAAGCTTTGGAAGCAGCTTTTGCAAAACAAGATATCCATCCAGGTGACTTAAAAGCATCT
GTAGAACAAGCTATAAACAAGTTGCTTGCACCTGTTCAAGAAATATTTAAGGATCCTAAA
CTTCAGGAACTCACTAAGAAAGCTTATCCACCTCCAGTAAAAGTAAAGGGAAATGTTAAT
TCAAACTCTGATGAAATAAGCCCTGTCAAATTAGATATCCGAGTTGGTCGTATAGTTGAT
GTATCAAGACATCCCGATGCTGACGCTCTCTATGTTGAGAAGATTGACCTTGGTGAAGAT
GAGCCTAGAACAATTGTATCTGGTCTTGTCAACTTTGTACCAATAGAGGAAATGCAGAAC
AGAGATGTAGTTGTTCTATGCAATTTAAAACCAGCTAAGATGCGTGGTGTCGAATCCAAG
GGTATGGTTCTCTGTGCATCTATTGACGAACCAAAACAAGTAGAACCTCTTGTAGTACCT
AAAGACAGCAAACCTGGCGATAGAATTGTTATTGAAGGCTATGAAACAGGGGAGCCAGAT
GATGTATTGAATCCCAAGAAAAAAGTTTGGGAGAAACTACAGGTTGATCTAAAGACTAAT
GATGATTTGTTTGCTGTGTGGCAAGGTAATAAACTTATCAGTAAAGTGAATGGCAATCCA
GTAACATCCGGTTCCATGAAGAACGCACCCATCAAGTAA
Protein sequence:
MSKIADFLNAGCEVTILFADLHAYLDNMKAPWELLSLRTQYYEAAIKAMLTSINVPLDKL
KFVRGTEYQLSKEYTLDVYRMSSVITDHDARKAGAEVVKQVEHPLLSGLLYPGLQALDEE
YLKVDAQFGGVDQRKIFTMSEKYLPQLGYAKRVHLMNPMVPGLTGGKMSASEEDSKIDLL
DNPANVKKKLKKAFCEPGNITENGVLSFTKHVVFPLMKAGETFKIYRAEEHGGNAEYDNF
EALEAAFAKQDIHPGDLKASVEQAINKLLAPVQEIFKDPKLQELTKKAYPPPVKVKGNVN
SNSDEISPVKLDIRVGRIVDVSRHPDADALYVEKIDLGEDEPRTIVSGLVNFVPIEEMQN
RDVVVLCNLKPAKMRGVESKGMVLCASIDEPKQVEPLVVPKDSKPGDRIVIEGYETGEPD
DVLNPKKKVWEKLQVDLKTNDDLFAVWQGNKLISKVNGNPVTSGSMKNAPIK