New model in OGS2.0 | DPOGS201484  |
---|---|
Genomic Position | scaffold1023:- 33358-64226 |
See gene structure | |
CDS Length | 3003 |
Paired RNAseq reads   | 2160 |
Single RNAseq reads   | 5389 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA002673 (1e-109) |
Best Drosophila hit   | CG30372, isoform B (0.0) |
Best Human hit | arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 (1e-180) |
Best NR hit (blastp)   | PREDICTED: similar to CG30372-PB [Apis mellifera] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to CG30372-PB [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0007264 small GTPase mediated signal transduction GO:0008060 ARF GTPase activator activity GO:0032312 regulation of ARF GTPase activity GO:0008270 zinc ion binding |
InterPro families    | IPR001164 Arf GTPase activating protein IPR001452 Src homology-3 domain IPR001849 Pleckstrin homology domain IPR002110 Ankyrin repeat IPR000679 Zinc finger, GATA-type IPR020683 Ankyrin repeat-containing domain IPR011993 Pleckstrin homology-type |
Orthology group | MCL10612 |
Nucleotide sequence:
ATGCCGGGTCTTATTGGTATTGGTGAATTTATTGACGAAACTCGAGAGGATTACAGTTCG
CCAACTACTTCGACATTCGTATCGCGTATGCCACAATGCAAACAGACCATTAACGCATTG
GAGGAGACCCTGGATTTTGATCGCGATGGACTAACAAAGCTCAAAAAAGCAATAAAAGCC
ATACACAACTCAGGGAATGCCCACGTGGATAATGAGATGTACCTGTCCCGGGCGCTGGAG
CGTCTCGGAGGAAACGCGCTCAGCAAAGATTCGGAACCCGACATAGGAGCCGCTTTTTTC
AAATTTGCGGTCGTCACCAAAGAACTGTCAGCACTCATGAAGACACTGATGCAAAATATA
AACAATATAGTGATGTTCCCTGTGGATAGTCTCTTAAAGGGTGATCTCAGAGGTGTGAAG
GGGGACCTGAAGAGACCGTTCGATAAGGCATCCAAAGACTACGAGTCAAAGTACCTGAAG
ATTGAGAAGGAAAAGAAGTCACAAGCGAAGGAAGCCGGCCTCATAAGGAGTGAAGTCACA
TCGGCTGAGATAGCTGATGAGATGGAGAAAGAGAGAAGATTGTTTCAGCTGCAAATGTGT
GAGTACCTGATAAAGTTTAATGAAATAAAAACCAAGAAAGGCATAGAACTGCTTCAGCAC
CTGGTGGAGTACTATCACGCACAAACTAATTATTTCCAAGATGGTTTAAAGACTATCGAA
CACTTCGGTGTGTACGTAGCGGATCTTAGTGTTCAATTGCAGAAGATAAGACAGCAGCAA
GACGACGAGCGAAGAAGATTATTGGAGTTGAGGAACATGTTGAGAGCAGCTACACCGCAA
GATAGAGAAGCGGCGGCTGCAGTGGGCGGATATTCACTTCACCAATTACAAGGTGACAAA
CAGCATGGAGTCACACGGAGCGGTTATCTTCTTAAAAAGTCGGAAGGTAAAGTTCGAAGG
GTCTGGCAAAAGAGAAGATGCAGAGTCACGGCTGAGGGTTTCTTGGACATATTCCACGCG
GACGAGAATAAAACTCCGGCCAGGGTCAATCTGCTTACGTGCCAGATAAAAGTGGCCTCG
GAGGATAAAAGGGCGTTTGATCTAGTCTCATATAATCGTACGTACCATTTCCAAGCTGAA
GATGAGAACGAACAGCGTACTTGGACCTCGGTCCTCGTGAATTGTAAGGAGGGAGCTCTG
ATGAGGGCCTTCCACCAACAGGCTGGTGAGAGTAATGACAATGGACACTCACTACTCGAT
CTCCAGAGATCAATCATCAGAGCAGTGAGAGCTATGCCAGGGAATCAAGTCTGTGCTGAC
TGCGGTTCAACTAATGATCCCACGTGGTTGTCAACGAACTTCGGCGTGATAGTGTGTATA
GAATGTTCTGGAAGCCATCGCGAACTCGGAGTACATATATCAAGGATACAATCTCTGACA
CTGGACAGACTGAGCACCTCACAGTTGCTGATAGCAAGGAACATGGGCAACCAGACGTTC
AATGAAGTCATGGAAAACACATTGGATGAAAGAGATAAACTCACACCAGAGAGCACCATG
GAGGAGAGACTGAGGTTTATACGGGAAAAGTACGTGTATAGAGCGTGGGCGGGCAGGACT
TGTAGAGATGAAACAGAGAGGCTGTCGGAAGTGGAACACGCCGTTAACAACGGACACTTA
CAGAACTTACTCCAGGCTTATGCTGAAGGGGCTGACTTGAGTTCAGCTCTGCCCGGTTCT
GATTGCGGTGAAACAGCGCTCCATCTGGCGATATCTAGAGAAATCGGCGACGGGTCCGGT
CTGCACATAGTGGATTTTCTGATCCAGAACGGCGGTTCACTGCTGGATAAGACCACCTTA
TCTGGGATGACTGCCCTACACCTGTGTGCAGCAACGGACAGGGCGGAGGCCATGAAATTG
CTGCTGAAAGCCGGTGCTGATACCACGCCGAAAGATATCAATGGAAGAACAGCTCTGTAC
ATCGCGAGACAACTTGGACACCACGCTTGTGTGGAATTGTTGGAAAGCGTTGATAAAAGG
GAAAAGAGTATATTCGAAAATATAAATATTGATTGGAATTTGTCACACGACGATGGCTCC
ACAGACTTCTCTGACGATGACACTGTCATCGATGAAAGGCAAAACGGCAGCGTTACTCCA
GAGAAAAAGTGTCCGCGTTCCCGCCCGCCGTCATACGCTGGTACGTGTGGGGGCGACTCC
CCTGTACTACGATCAAGATCCTCAACCTGCGACTCCCTCCACCACGCACCGCCAACCCCT
ACCACGCTACCGCGAAAACCCAACTATAATATAGGCAGTTTAAAAAAGCGTGTCGCCCCC
CTTCCCCCCGCGGTGTCCGTGTCTCACCCCCCCTCGCTGGCTGCTCTGCCATCACACGCG
AGATCCACACCATCGCCATCCGCTGACAACACCAGGTCCATACATGGGACCGGTGCAGCG
CCGGCAGTGAAGCCGCGACCTCAACAGCCGCCGCCCACGCCGCCGCCCGTGTCACTGCAC
AACGGAGCCCATAGGGACGAACCGACACCTCCGCCCAGGAAGAAGAAAAATAGATTGCAC
CTGGAAAATGCTGTGAAAGGAAAACTTAAAAGGGAATGTTCTAGTCAAGATTCATCGTTG
GAGTTATGTGATATATCTGATGGCTTGGACGACAGTAGGCTGCAGTCATGTCTGTCGGAC
AGTTCTAGATCTCGTGAGAGAACGAGACGCAGCGACAGGTCCCTAGATGTGTCAGACACT
TCCAGTCTTCACTCGAGGTCACCTTCCACTTCTATAACTATGATGGGTGGAGGTATGAGG
AGGTGCCGAGCGCTATACGACTGTTCTGCTGATAATGAGGACGAGCTGTCGTTCAGGGAG
GGCGAGGTCATAGTCGTCATCAACGAACGAACCGAAGACGACAACTGGATGGAGGGACAG
GTCGAGGGGACCAGCCGCCGCGGCATGTTCCCCGTCTCTTTCGTACACATGCTGCCTGAT
TAG
Protein sequence:
MPGLIGIGEFIDETREDYSSPTTSTFVSRMPQCKQTINALEETLDFDRDGLTKLKKAIKA
IHNSGNAHVDNEMYLSRALERLGGNALSKDSEPDIGAAFFKFAVVTKELSALMKTLMQNI
NNIVMFPVDSLLKGDLRGVKGDLKRPFDKASKDYESKYLKIEKEKKSQAKEAGLIRSEVT
SAEIADEMEKERRLFQLQMCEYLIKFNEIKTKKGIELLQHLVEYYHAQTNYFQDGLKTIE
HFGVYVADLSVQLQKIRQQQDDERRRLLELRNMLRAATPQDREAAAAVGGYSLHQLQGDK
QHGVTRSGYLLKKSEGKVRRVWQKRRCRVTAEGFLDIFHADENKTPARVNLLTCQIKVAS
EDKRAFDLVSYNRTYHFQAEDENEQRTWTSVLVNCKEGALMRAFHQQAGESNDNGHSLLD
LQRSIIRAVRAMPGNQVCADCGSTNDPTWLSTNFGVIVCIECSGSHRELGVHISRIQSLT
LDRLSTSQLLIARNMGNQTFNEVMENTLDERDKLTPESTMEERLRFIREKYVYRAWAGRT
CRDETERLSEVEHAVNNGHLQNLLQAYAEGADLSSALPGSDCGETALHLAISREIGDGSG
LHIVDFLIQNGGSLLDKTTLSGMTALHLCAATDRAEAMKLLLKAGADTTPKDINGRTALY
IARQLGHHACVELLESVDKREKSIFENINIDWNLSHDDGSTDFSDDDTVIDERQNGSVTP
EKKCPRSRPPSYAGTCGGDSPVLRSRSSTCDSLHHAPPTPTTLPRKPNYNIGSLKKRVAP
LPPAVSVSHPPSLAALPSHARSTPSPSADNTRSIHGTGAAPAVKPRPQQPPPTPPPVSLH
NGAHRDEPTPPPRKKKNRLHLENAVKGKLKRECSSQDSSLELCDISDGLDDSRLQSCLSD
SSRSRERTRRSDRSLDVSDTSSLHSRSPSTSITMMGGGMRRCRALYDCSADNEDELSFRE
GEVIVVINERTEDDNWMEGQVEGTSRRGMFPVSFVHMLPD