| New model in OGS2.0 | DPOGS201468 |
|---|---|
| Genomic Position | scaffold1023:+ 23986-26559 |
| See gene structure | |
| CDS Length | 2574 |
| Paired RNAseq reads | 17243 |
| Single RNAseq reads | 46369 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002618 (0.0) |
| Best Drosophila hit | Gp150, isoform D (5e-67) |
| Best Human hit | platelet glycoprotein V precursor (3e-09) |
| Best NR hit (blastp) | GI20549 [Drosophila mojavensis] (6e-110) |
| Best NR hit (blastx) | leucine-rich transmembrane protein [Aedes aegypti] (1e-89) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0007185 transmembrane receptor protein tyrosine phosphatase signaling pathway GO:0048749 compound eye development GO:0005515 protein binding GO:0002121 inter-male aggressive behavior |
| InterPro families | IPR003591 Leucine-rich repeat, typical subtype IPR001611 Leucine-rich repeat |
| Orthology group | MCL16974 |
Nucleotide sequence:
ATGGGGGCTAAGTCCCAGGAGTTAGTCCTGCTCCTGGCAGTATGTGCTCTTGCAATCTGC
GAGACTGTCAACAAAACTGCGAAGAAAGATAACAAAGATGCAGACAATTTCCTCTTCCAA
TATGAAGATTATGATTCATCAGATAACCAGGAAGTCCTGTTTAACGAAGACAGGCCCTGC
CCTAGAGACTGTCTATGCACTGTATCTCAAGGATATAGAACAGCTAAGTGTAATCGTCTA
GAACTAGGAACACAAAAGTTTGGAGACGACATAACCGACCTTGTCATAGAAAACGCGGAT
CCAAACTCTCCTATAACATTGGATGATTTTATTTTCAAAAAATTAGGTTTGCATCAAATT
GCAACTATCAAAATTGTAAACAGCACCATCACATCAGTTGGGGCTAATGCTTTCCACGGA
CTTCACGAACTTTACGCAGTAAACCTGTCCAATAATAAACTAAAAAGCATTCACTCAGAA
ACGTTTGCAAATAATAAAAAATTATTACTGCTAACACTTTCTAACAACCCACTTAAGTTT
CCTGCACCTGGCTCACAAGAATATTTTCTAAATGCTTCATCCGTTCAAGAATTTGATATT
TCATATTGCAACATGCAATACCTAACAGCGAATACGATTAAAAACATGCCCGGACTTATG
TATTTGAATCTAGCTGGAAATAACTTATCCAATATGGAAGATGACACGTTTAAAACGCTA
TTAGATTTGGAGGAATTAGACTTGAGTGACAATAATATAAAAATTTTACCAGGAGAAATA
TTTTCCGAAAACACAGAGCTTGCTACGCTCCACATTCAAAGGAATCCCATCGATTCGGTA
TTCGGTTTACAAATATCCGACCTACTCACCCTTAACGCTGGTCAAACAAATATAAGCTTC
ATTGGACCATCTATGTTCCTCGGTATGACTTACATAGCTAATTTAAATCTGAGCGGAAAT
AGTCTGAAAAAAATCCATAACCAAGCATTCCACAAATTAATCGAACTCAACTACCTAGAC
CTGTCTTATAACGACTTAGACTTCGTTTCGAGCATTTTAATTAAAGAGAACATTGAGCTG
GATATTTTCAAAATTTCAAACAATCCTCGTCTTAAACATTTGCCTATGGAGGGATTCAAT
TGCTCTGCGGAACAATTCAACATTTATCTCTTTGATGCATCAAACTGTGGGCTGGAAGAA
ATATTCGACGATTCTCTGAAAACGTTTACGGCGCTATCCCAAATAAACCTCTCTGGAAAC
AAAATTAAAACTATAAGTAGCAAAGTATTTTCCAGATCCCCCAAATTGATTGATATTAAT
TTGTCTTATAATCAAATTACTTCTCTGGACAGCAAAGTTTTTGAGAAAAACAGCGATTTA
GGAAAATTAAACCTTCAAGGAAACCCTCTAAAAGTTCTTTCTACTGAAATATTTAGTTAT
ACACCAATACTGACTTGGTTAGATATGAGTCATGCGGAGCTGACTGCTCTTTGGAAGGTA
GAAAAGACTCAACCAGCAACGCTGCTCAACAACTTAAATTTCCTGAACGTTTCATATAAC
CGCATCACTGAGATCAAGCAAACCGAATTAGACACGCTTAACAAATTACGCACACTTGAT
ATAAGTAACAATTTACTTGCTTGTAGCCGGGACTTCGAAAACCTCATGTCTTGGTTGAGC
CAACATAAGGTGTCCCCTAATTCCAACACGGCCAGCATTGCTAACTTAGCTAAGGATACA
AAAGATGAAGAGACTAACTATAGTTGGGAATTCCTGTCACGAAAAACATGTGGAACAGCA
ATGCCACAGCCAGTCGAACCCTTGCCATCCGTGTCCGATGAAGAAATTTGGGAAAGAATC
GACAAAGATGCTGAGGGTAACTTCGATTTGAAGGACACCCTTGATGATGGCAAGATAGCC
GATGATACTAAACTAACAAATGATGAATCAAACGAAAAGATCGATGACGACAACGCAGAC
AATGACGCCGATGATGAAGATGAAGACGGGGAAGATGATGACGATGACGAGACAGGAGAA
GATTATGATGATAATGATGATAATCTCGATCTTAAAGTCAATTTGATTGACAAAACGGTC
TCTCAGTCTACGGCTAAACCTACAGCTTCATCTCAAAAGGACAAGGTGGATATTGCAATC
AAACTTCTGGAAAACGACAGCGTCTACGATGACCTGGAACCTGAAGTATATGTTCAAGAA
TCAATGAAAGATCAAGAACACGGCCGTTATGAGTATCTGTGGCCGATGTTGATCGCTATT
TTGGGAGCGCTACTTCTTTTGATTGTCCTCGGAAAGGTCGTCATGATGATATGCCAGAGA
AGGAACAAGCAAATAAGATACAACAGTGCCATAATCGCCGCCATGAGCAATGCTGGTCGC
ACAAAGAAGGACTGCGGTCTCGTTTACCAGCAGCTATCAGAGGAATTAACAGGACCTACG
ACACCTAAACTCAACCGCTATGCACCGTTGCACAACGTTACAGTGAACGCATCTAACATG
TCCTACGAAAGCAGTCCTTTCCACCACAGCAACATTGTGCCAGAGGCTGTGTGA
Protein sequence:
MGAKSQELVLLLAVCALAICETVNKTAKKDNKDADNFLFQYEDYDSSDNQEVLFNEDRPC
PRDCLCTVSQGYRTAKCNRLELGTQKFGDDITDLVIENADPNSPITLDDFIFKKLGLHQI
ATIKIVNSTITSVGANAFHGLHELYAVNLSNNKLKSIHSETFANNKKLLLLTLSNNPLKF
PAPGSQEYFLNASSVQEFDISYCNMQYLTANTIKNMPGLMYLNLAGNNLSNMEDDTFKTL
LDLEELDLSDNNIKILPGEIFSENTELATLHIQRNPIDSVFGLQISDLLTLNAGQTNISF
IGPSMFLGMTYIANLNLSGNSLKKIHNQAFHKLIELNYLDLSYNDLDFVSSILIKENIEL
DIFKISNNPRLKHLPMEGFNCSAEQFNIYLFDASNCGLEEIFDDSLKTFTALSQINLSGN
KIKTISSKVFSRSPKLIDINLSYNQITSLDSKVFEKNSDLGKLNLQGNPLKVLSTEIFSY
TPILTWLDMSHAELTALWKVEKTQPATLLNNLNFLNVSYNRITEIKQTELDTLNKLRTLD
ISNNLLACSRDFENLMSWLSQHKVSPNSNTASIANLAKDTKDEETNYSWEFLSRKTCGTA
MPQPVEPLPSVSDEEIWERIDKDAEGNFDLKDTLDDGKIADDTKLTNDESNEKIDDDNAD
NDADDEDEDGEDDDDDETGEDYDDNDDNLDLKVNLIDKTVSQSTAKPTASSQKDKVDIAI
KLLENDSVYDDLEPEVYVQESMKDQEHGRYEYLWPMLIAILGALLLLIVLGKVVMMICQR
RNKQIRYNSAIIAAMSNAGRTKKDCGLVYQQLSEELTGPTTPKLNRYAPLHNVTVNASNM
SYESSPFHHSNIVPEAV