New model in OGS2.0 | DPOGS211939  |
---|---|
Genomic Position | scaffold332:+ 36469-47237 |
See gene structure | |
CDS Length | 3690 |
Paired RNAseq reads   | 282 |
Single RNAseq reads   | 818 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000888 (0.0) |
Best Drosophila hit   | robo3 (0.0) |
Best Human hit | roundabout homolog 2 isoform ROBO2a (2e-131) |
Best NR hit (blastp)   | PREDICTED: similar to roundabout [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to roundabout [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0007419 ventral cord development GO:0007411 axon guidance GO:0005886 plasma membrane GO:0008046 axon guidance receptor activity GO:0008038 neuron recognition GO:0048036 central complex development GO:0016319 mushroom body development |
InterPro families    | IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR003961 Fibronectin, type III IPR007110 Immunoglobulin-like IPR008957 Fibronectin type III domain IPR013098 Immunoglobulin I-set IPR013151 Immunoglobulin IPR013783 Immunoglobulin-like fold |
Orthology group | MCL10180 |
Nucleotide sequence:
ATGGACACGTTCGTCTTACTGACCTCTCTCTTGGGACTCTTCTGTCTTGGTCTTGTGGAA
GGAGGTCTAAGCGATGATTACATGAGCAGTGGGGAAGCGCCGTATATTATAGAACAACCA
ATAGATGTCACTGTGGCTCGCCATCAACCTGCAACATTAAACTGCCGAGCTGGCGGTTCA
CCCACTCCTACCATTCGGTGGTATAAAAGCGGTGTCCTTGTTGTATCGGACACCCATAGA
AGCCTTTTACCTGCCGGCGGTTTATTCTTTCTGAGAGCAACCCATGGAAGGGCACATTCA
GATGCGGGAGTGTACTGGTGTGAAGCCACCAATCCATATGGCACAGCTAGAAGTCGCAAT
GCTACACTTCACGTCGCTGTTCTTCGCGAAGAATTTAGACTAGAACCAGTAACTTCACAA
ACAGCTCAAGGAGAAACAGTAATACTAGAATGTTCACCACCGCGTGGCTCCCCTGAGCCC
ACAGTCTATTGGAAGAAAGATGGACAAATTTTACATTTCGACGGAGATTCAAGAATGCAT
TTAGTAGATGGAGGTAGTCTTGTAATACAAGATGCTACGCAAACTGACGCTGGTAGATAT
CAGTGCATTGCGAGGAATGCAGCTGGTACAAGAGAGTCTTCTATTGCTACGCTCAGAATA
CACATTAAGCCATACCTAATCGCCGGGCCTGAAGACATCGTTGCACAAACTGGAGGTAGC
GTGACCTTCAAATGCAGGGTTGGAGGCGATCCCTTACCTGATGTTTTGTGGCGAAGAACA
GCCGGAGGTGGTAACATGCCACTCGGGCGTGTCAAAGTGCTAGACGATCGTAGCCTCAGG
CTTGACAACGTGATTTTGACAGACGAAGGGGAGTACACATGTGAAGCTGACAATGCTGTA
GGAGCTGTGAGTGCCACAGGATATTTAACTGTATATGATCCCCCAACAGTTACATTAAAA
CCAAGTTCAGTTATAGTAGAAAGTGGAACAAGTGTTACATTTACATGTATGTCGACTGGA
AAACCCCAAGCTACCATGTTTTGGAGTCTAGAAGGCAACCGAACAATAATATTACCAGGA
ACATCGAAAGGTAAATACCACGCTTCACCAGTATTGGATAATGTGACAAGATTAACAATC
AATAATACTAGTAAAAATGAAAGCGGGAACACAGTAGTTTGTTCTGCAGTCAACTTTGCC
GGAAGTTCTTTTATAAGAGGAAAAATAAGCGTGACAACAGACGATGACCGACCACCACCA
ATCATAACAAACGGTCCCTCTAACCAAACGTTACCTATAAAATCGATGGCAGTTTTTCCC
TGTGCGGCCATCGGCACACCTGAACCAATTATTGCCTGGTATTTCGAAGGGGAAGCTTTA
ATACAAAATCAGAGAAGAAATATATCAAGTGATGGAACATTGACATTAAGAGATTTAGAC
AAAGAAGATAGTGGTACTTACACATGTGTTGCATCATCACAACATGGAAAGTATGTATGG
AGTGGGGTTTTATTAGTTGACAGTCCAACAAATCCCAACATCCACTTCTTCAGAGCAGCT
GACACATCAGCCTTACCAGGTAGACCAACGAAACCAATAACCTATAATATAACAGATACG
AGTGTGACTTTAACATGGAATCAAAATAACAAAATTGGTTCATCTTCTATTATCGGATAT
CAAATAGAAATGTTTTCGAGGGAGACATTGTCAGGAAAAAATACCCCCAGAAACTCCAGA
GGGTGGGTGGTTGTTTCAAAGAGAGTATATCAAACACATTTTGTAGTAAAATCTTTGATA
CCCGGTATAACGTATATGTTTATGGTGAGAGCAGAAAATTCTCATGGATTATCAGCACCG
AGTCTAGTTTCGGATGCCATAACCGTAGGCGATGATACAAACGGTTTGTGGGAAGGTGGA
TTATTTGCAAATAACACCGAATATAGAAAAAATATTATGACTGATAATATTGTAGACTTA
ATTGAGGCGACGCCTATCGATTCCAAGACTATAAAGCTCATGTGGGAGATATTAAACTTC
TTTTATCTAGAGGGCCTATTCATATATTATAGACCCTTAGATAATAAGACAATCGATTAC
GAAATGAAAACTATTTTGCATTCCAATGACGTATCTGGCTATGAAATAACGACCCTACGA
AAATATATGAAATACGAGTTCTTCCTAGTACCCTTCTATAAGAAATTTGAAGGAAAGCCT
TCGAATTCCAGAATAGCTCAGACGTTAGATGACGTTCCCGATGGTCCTCCAACAAATATC
GAAATGTACATACTAAACGTCACAACAGTCCATTTGAAATGGCATCCCCCGGAGCCAGAT
TTGCAGAATGGTGTAGTTATAGGATATAACGTCGTCTTAAATTGGTTGGACATACCGGCT
AACAAGTCTATGATAGCTATTAATACCACCGTCTATCAAGCCACAAGTCTTATAATGACT
AATCTGACATCTGGCGTCAGTTATTCAGTGCAAATTGCTGCAGAAACTATTGTTGGTTTG
GGGCCATTTAGCCAGAAGGTCTATTTGAATATAGATTCGCGCTCCGTAGGATTAGATCCA
CTGTCAAGATATCCCAATAATGGAGAAGTTTCCATTGTTGCCGGAGATTTTGTAATGGAA
ACATGGTTTTATTTCCTCATTGGGGCTATTGTGCTGTTTAAAGTTATTATGATTGCTGGC
ATTATTTATGTTCGAAGACATAACATATTTGCTAAAAAGTCAGCACTACCAAATATTTAC
AATTCCAATGGCACCAGTCTAGTTACACAAATGAATATTAAGGCCGCTGTATCGCTATCT
CATCCGCTAAGTAGTTGTTACAATAAGAACTCCGTTACAAAAACGGAATCACTACTATGG
ATGGAAAACCAACCAGGCCTATGTATGTCCGGGAATCAAACGAGTCAGAGTAAAGAAAAA
ACCAATTCTGAATACGATAAAGTCAGTCATCAGCTTCCTGAATATGCAGAAGTCACTGCT
TCGAGGGTGACTGGGAATGAATGGAATACGAGCAAAACTGCCACCTCGCCCGCCGCCTAC
GCCTCAGTGACACTAGTAGCAAACACGAGGCAGTGTGTTAGTTCGCTGGGTTGGTTTCCT
CCGGGAAGTAAAAGTATTGATAACTATGAAAACCGCTATCCTGATGAAGAATTATACCCA
GCTAGCAACGGAGGATATTACAACAGAAATGTGTATAGCGAGAAATATTTTCAAGGGCAT
CCTAACGTCTTGAAATTTTACGACCTTCCATCGGTAGACAAAACCCAAAAAGCGCAAATA
AGATACAACCAAAGTTTAGATGAGAGGAAAGTTGATAAAAACTTTAAGGCTGAAGTAACC
CAATCTCTCATAGGACGAAGTTACGGCGTGAGTTCTAGAAAAAATTCGGAATCGGAAACT
ACATACAGAGCATTCGGCGAGGATGATTCTGATGATGAACATTACAGAGATGATGGTGGC
TATGATGAACTTCAAGCGATGCAGCCTCAGAGACAGAGATCGAAACATCAGTACGAAAGA
CCAAATTTCGATAATGACCCGACTAGAACACTAGCCCGTCTTACATCTTTTAAACAAGGT
CAGAACATTCACAGCGGTAACCCAGGATCCCTAGCGCCAACCCAACCTCCACCGGCTCCG
AATCCAAGGATTGATTCAGTGACACGGTAG
Protein sequence:
MDTFVLLTSLLGLFCLGLVEGGLSDDYMSSGEAPYIIEQPIDVTVARHQPATLNCRAGGS
PTPTIRWYKSGVLVVSDTHRSLLPAGGLFFLRATHGRAHSDAGVYWCEATNPYGTARSRN
ATLHVAVLREEFRLEPVTSQTAQGETVILECSPPRGSPEPTVYWKKDGQILHFDGDSRMH
LVDGGSLVIQDATQTDAGRYQCIARNAAGTRESSIATLRIHIKPYLIAGPEDIVAQTGGS
VTFKCRVGGDPLPDVLWRRTAGGGNMPLGRVKVLDDRSLRLDNVILTDEGEYTCEADNAV
GAVSATGYLTVYDPPTVTLKPSSVIVESGTSVTFTCMSTGKPQATMFWSLEGNRTIILPG
TSKGKYHASPVLDNVTRLTINNTSKNESGNTVVCSAVNFAGSSFIRGKISVTTDDDRPPP
IITNGPSNQTLPIKSMAVFPCAAIGTPEPIIAWYFEGEALIQNQRRNISSDGTLTLRDLD
KEDSGTYTCVASSQHGKYVWSGVLLVDSPTNPNIHFFRAADTSALPGRPTKPITYNITDT
SVTLTWNQNNKIGSSSIIGYQIEMFSRETLSGKNTPRNSRGWVVVSKRVYQTHFVVKSLI
PGITYMFMVRAENSHGLSAPSLVSDAITVGDDTNGLWEGGLFANNTEYRKNIMTDNIVDL
IEATPIDSKTIKLMWEILNFFYLEGLFIYYRPLDNKTIDYEMKTILHSNDVSGYEITTLR
KYMKYEFFLVPFYKKFEGKPSNSRIAQTLDDVPDGPPTNIEMYILNVTTVHLKWHPPEPD
LQNGVVIGYNVVLNWLDIPANKSMIAINTTVYQATSLIMTNLTSGVSYSVQIAAETIVGL
GPFSQKVYLNIDSRSVGLDPLSRYPNNGEVSIVAGDFVMETWFYFLIGAIVLFKVIMIAG
IIYVRRHNIFAKKSALPNIYNSNGTSLVTQMNIKAAVSLSHPLSSCYNKNSVTKTESLLW
MENQPGLCMSGNQTSQSKEKTNSEYDKVSHQLPEYAEVTASRVTGNEWNTSKTATSPAAY
ASVTLVANTRQCVSSLGWFPPGSKSIDNYENRYPDEELYPASNGGYYNRNVYSEKYFQGH
PNVLKFYDLPSVDKTQKAQIRYNQSLDERKVDKNFKAEVTQSLIGRSYGVSSRKNSESET
TYRAFGEDDSDDEHYRDDGGYDELQAMQPQRQRSKHQYERPNFDNDPTRTLARLTSFKQG
QNIHSGNPGSLAPTQPPPAPNPRIDSVTR