| New model in OGS2.0 | DPOGS202343 |
|---|---|
| Genomic Position | scaffold2891:- 7635-8955 |
| See gene structure | |
| CDS Length | 612 |
| Paired RNAseq reads | 186 |
| Single RNAseq reads | 615 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004839 (3e-55) |
| Best Drosophila hit | mitochondrial ribosomal protein L40 (2e-23) |
| Best Human hit | 39S ribosomal protein L40, mitochondrial precursor (1e-14) |
| Best NR hit (blastp) | mitochondrial ribosomal protein, L40, putative [Aedes aegypti] (3e-48) |
| Best NR hit (blastx) | 39S ribosomal protein L40, mitochondrial [Culex quinquefasciatus] (7e-30) |
| GeneOntology terms | GO:0003735 structural constituent of ribosome GO:0005762 mitochondrial large ribosomal subunit GO:0006412 translation |
| InterPro families | IPR019192 Ribosomal protein L28/L40, mitochondrial |
| Orthology group | MCL14427 |
Nucleotide sequence:
ATGTTAAGTCTCAATATGTTGAAACAATTTTCACGTTTAGCAATAAATTCGGTTGCTAAA
GCAACAGTTAATGCCAGAAATATTAATACGTCTGCAGTTGTTCAGATTAGGATAACCGAT
CAATTATGGGCAGAACCTATGAAAAAGAAGAAGAAAATGGATCCCGCCATAATAAAAGCG
CGTGAAGAAAGGCGTCGTAAAAAGTTAGAGAAAAATATTCGAAGGCTAGAAAAAAATGCA
AGACAGTTAAAACCAATTGATGAGTTAGAACCTCCACTACATCTTACCGACTCTCTAGGA
AAACGTAAAAGACAAGTTCAAGTGACTCCTGAGCAACAAGAGGCGAGAGATGTTTTACTA
AAAGAATGGACCCGTTACAAGAAACAGGAGTACATGGCTAATGTAGCCCAGATTGATAGA
ATCATGGCATCACAAAGACGAGCACTAGACAAATTGTATGAAGAGAGTGAAGATTTGTAT
AATGAAGCAATAATGCCTGATCTGAGTTTGGTGCCATACTCCATCTCAGGACCTTATGCA
ACACCGCCCATTAAGAATTATGAGTCGCCCGACGGTGAATACACAGATATATCCAAGAAT
TGGGGAAATTAG
Protein sequence:
MLSLNMLKQFSRLAINSVAKATVNARNINTSAVVQIRITDQLWAEPMKKKKKMDPAIIKA
REERRRKKLEKNIRRLEKNARQLKPIDELEPPLHLTDSLGKRKRQVQVTPEQQEARDVLL
KEWTRYKKQEYMANVAQIDRIMASQRRALDKLYEESEDLYNEAIMPDLSLVPYSISGPYA
TPPIKNYESPDGEYTDISKNWGN