| New model in OGS2.0 | DPOGS214066 |
|---|---|
| Genomic Position | scaffold1020:+ 41688-45200 |
| See gene structure | |
| CDS Length | 3513 |
| Paired RNAseq reads | 802 |
| Single RNAseq reads | 2021 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010560 (0.0) |
| Best Drosophila hit | retinal degeneration B, isoform F (0.0) |
| Best Human hit | membrane-associated phosphatidylinositol transfer protein 1 isoform b (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to retinal degeneration B CG11111-PA, isoform A isoform 1 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to m-rdgb2 retinal degeneration protein b [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0030384 phosphoinositide metabolic process GO:0005388 calcium-transporting ATPase activity GO:0005886 plasma membrane GO:0005887 integral to plasma membrane GO:0007608 sensory perception of smell GO:0035091 phosphoinositide binding GO:0008526 phosphatidylinositol transporter activity GO:0016021 integral to membrane GO:0005509 calcium ion binding GO:0007602 phototransduction GO:0016029 subrhabdomeral cisterna GO:0016056 rhodopsin mediated signaling pathway GO:0008525 phosphatidylcholine transmembrane transporter activity GO:0016059 deactivation of rhodopsin mediated signaling GO:0007601 visual perception GO:0045494 photoreceptor cell maintenance GO:0046872 metal ion binding GO:0005622 intracellular GO:0006810 transport |
| InterPro families | IPR001666 Phosphatidylinositol transfer protein IPR013209 LNS2, Lipin/Ned1/Smp2 IPR004177 DDHD IPR023214 HAD-like domain IPR023393 START-like domain |
| Orthology group | MCL10921 |
Nucleotide sequence:
ATGTTAATCAAAGAATATAGAATACCATTGCCACTCACTGTAGAAGAGTATCGCATAGCC
CAATTGTATATGATAGCGAAGAAAAGCCGAGAAGAAAGTTCCGGTGAGGGTAGTGGAGTT
GAGATTATTGTTAATGAGCCATATGACAATGGCCCTGGTGGAAACGGGCAGTATACACAG
AAAATATATCATGTTGGAAGCCACTTGCCAGGTTGGTTCAAAAGCCTACTTCCTAAATCA
GCCTTAACAGTGTCTGAAGAAGCATGGAACGCTTATCCCTATACTAAAACAAGATACACC
TGTCCATTTGTTGAAAAATTTTCACTTGAAATTGAAACCTATTATTTTGCTGACAATGGT
CATCAGGAAAATGTCTTTAAATTATCAGGAAGTGACTTAAAAAATAGAGCTGTTGATATT
ATCGATGTAGTTAAGGATCAGCTTTATGGTGCGGATTACGTGAAAGAAGAAGATCCAAAG
ATATTTGTTTCTCAAAAATGTAACAGAGGGCCATTATCGGAGTCATGGCTCGAAGATTAC
TGGCGTGAAGTTCAAGGCAAAACACAGCCATTACCGAATGGAAAATCACTCATGTGTGCG
TATAAGTTGTGTAGGGTGGAATTCCGTTATTGGGGAATGCAAACTAAATTGGAAAAATTT
ATTCACGATGTGGCGCTTAGAAAAACGATGCTTCGAGCTCATCGTCAAGCATGGGCCTGG
CAAGACGAATGGCACGGCTTGACTATGGACGATATAAGAGAAATTGAGAGGCAAACACAG
CTGGCTTTGCAAAAGAAAATGGCGGGAGATGTTGGTGAAGACACTGATTTATCTGAAGAG
AATTCAAAGTCTTTAGCTGCTACTATGAGCAGTCTTGAAAAGAATGAGGATACTGCGAGT
CCAGTATCAGTCAAGAAAGGTATGGAAAAGAGAGTACAAAAGCAATTAAGTCCTGAAAGT
ACTCCTCCATCAGAGCCCAAATCGTGTTCAAAGTCTAACCTTAGATCATCTTCTTCGGGG
TCCTTAAAAAGTTTGCAAGTCCAAGTGGCCAGTTGGAGAATGGAAACTCTTGTTAGGGAA
TCAGAAACAGAAACTGGTTCTGAAGATGAGTTTTATGATTGCGAATCATCATTTAACAAA
TGGTCTTCGATGTGTTCTTTAGATGAAGGTGATATAGATATCTCACCAACACAAGGTGAT
CTGAATCAAGAAGACAGTATATTTAATCCCACGTTCTTAAAACGAGTTACCTCAGAAAGA
GGTTCACGAAGATTGACAAGCTTGCAGAGTCACCAGAGCATAGACGGATGTCCTGATACT
CCAGTTCATAGTTCCTGTCCTACAACAGTCTTAATACTTGTTTTTCACGCTGGTAGTGTA
CTTGATGCAAATGTTGACATGACTGCAAAGAAATCTGACGTCACTACATTTAAAGGAGCC
TTTGAATCGGTTATGCGTCAACACTATCCCACTCTTGTGGGACACATTACTATAAAATTA
GTTTCGTGTCCTTCTCTCTGTACAGAGGCTCTTGGAGTATTATCTACTCTGAGTCCCTAC
AGCTTTGATTGCTCCCCATCTACAGTAGATAGTCCATCTCTGACAAATGATCTCATTCCG
ATAGGTGCTATACCACTTATCGCAACCTCCTCTCCAGAGTATCATGAATATGTAACTAAA
ACTATCACGGCTGCAAATGTTGTTTATAATGATTTTATCAAGTCAGATGATGGAAAAGGT
TTTAACGGTCAGGTCTGTATTGTTGGTGACAGTATGGGCTCTATATTAGCATATGACGCT
TTGTGTCGAACTTTACAATATCAGTCACGACATGATAGTGAAAATAGTATATTAGATACT
GAAATAACCATCCGTAACGAGCCATCAGAACATTACTTAAATAAATCTCATCTTCAAGCT
CCGACGCCAAGAAGACGATCGTCTACAGCCAGCGACAATCAAACAAAGTTGGAATTTGAA
GTTAGTGACTTCTTTACCTTTGGGAGTCCGCTCTCACTTATACTAGCTTCAAGAAAAATA
TCAGATGACAAATTTAAAGATCTCACGAAGCCACCTGTCCAACAAATATATAACTTATTT
CACCCAACGGATCCTGTCGCGTCTAGATTGGAACCATTGCTTTCAGCAAGATTTAGTAAT
CTAGCACCGATTAATGTAGCTAGATACGCTAAGTATCCTCTGGGTAACGGACAACCATAC
CATTTGATGGAGCTTATACACACTCATCCGACGTTATTCGGCGACCACCTACCAATGCCA
CCTACTCCTGTTTTAAGAAGACTTTCTGAAGCATCAGTGCAAAGTACAGTTAGTGGTTTA
GTGGATAATATACCATTGATCACAATGAATGCCCTCCAACAAAAATGGTGGGGCACGAAG
CGATTGGACTATGCCCTTTATTGCCCCGAAGGGTTAACAAACTTCCCTATGAATGCTTTG
CCGCATCTATTTCATGCAAGCTACTGGGAAAGTTCGGATGTTATTGCTTTTATATTGAGA
CAAGTGGGTCATTTTGATTTGGCTCTATATGGTCAACAAGAAGATAAAGACTGTTCTCTG
TTTAAACCAGGACAGGATAAGGAAAAGTGGATGAGGAAACGTACATCGGTTAAATTAAAA
AATGTCGCAGCCAACCATAGAGCCAATGACGTGATTGTCGGCGAGGGCTGTCCACAAACG
TTCATTGCTAGATTTATGTACGGGCCTTTAGATATGATTACATTGACCGGGGAGAAAGTA
GATATACATATGATAAGAGACCCGCCTGCTGGTGAATGGACTTTATTATCAACAGTTGTG
ACTGACAAAACTGGAAGGATTACTTACACACTGACTGATAAGCAAAGCGTCGGATGTGGT
ATCTATCCCGTCCGAGCAGTCGTACGTGGTGATCATACTAGTTGCAACTTCCATCTAGCT
GTGATACCTCCACAAACGGAGTGTGTAGTATTCAGTATTGACGGATCTTTCACGGCGAGT
GTTTCGGTTACTGGTCGAGATCCGAAGGTGAGGGCTGGTGCTGTGGATGTCGTACGTTTC
TGGCAGGATCTCGGTTATCTCATCCTGTATATAACAGGAAGGCCGGATATGCAACAAAGG
AAAGTCGTCTCCTGGTTAGCGGAACATAATTTTCCTCACGGTTTAGTCTTTTTCTCGGAC
GGATTCTCCACCGATCCCTTGGGTCACAAAGCGGCGCATCTACACAGTCTCATAACCGAA
CATGGAGTTATATTCCAAGCAGCCTACGGTTCGGGTAAAGATATCAACGTGTACCACAAC
TGTGGTTTGCCGCAGAAGCAAATATATGCGATTGGTAAGATTAGTAAGAAATATAATAAC
CTAGCGACAACCTTGAATGACGGTTACGCTTCTCATTTGGCGGACTTGAAGCAACCAGGG
GCTGTGAGGCCGGCCAGGGGGAACGCCAGACTTCTCGTACCGCGGCGTCTACTCGCATCA
GTAAGTAATTCCTCTTCCCGTGGACGTCGCTGA
Protein sequence:
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESSGEGSGVEIIVNEPYDNGPGGNGQYTQ
KIYHVGSHLPGWFKSLLPKSALTVSEEAWNAYPYTKTRYTCPFVEKFSLEIETYYFADNG
HQENVFKLSGSDLKNRAVDIIDVVKDQLYGADYVKEEDPKIFVSQKCNRGPLSESWLEDY
WREVQGKTQPLPNGKSLMCAYKLCRVEFRYWGMQTKLEKFIHDVALRKTMLRAHRQAWAW
QDEWHGLTMDDIREIERQTQLALQKKMAGDVGEDTDLSEENSKSLAATMSSLEKNEDTAS
PVSVKKGMEKRVQKQLSPESTPPSEPKSCSKSNLRSSSSGSLKSLQVQVASWRMETLVRE
SETETGSEDEFYDCESSFNKWSSMCSLDEGDIDISPTQGDLNQEDSIFNPTFLKRVTSER
GSRRLTSLQSHQSIDGCPDTPVHSSCPTTVLILVFHAGSVLDANVDMTAKKSDVTTFKGA
FESVMRQHYPTLVGHITIKLVSCPSLCTEALGVLSTLSPYSFDCSPSTVDSPSLTNDLIP
IGAIPLIATSSPEYHEYVTKTITAANVVYNDFIKSDDGKGFNGQVCIVGDSMGSILAYDA
LCRTLQYQSRHDSENSILDTEITIRNEPSEHYLNKSHLQAPTPRRRSSTASDNQTKLEFE
VSDFFTFGSPLSLILASRKISDDKFKDLTKPPVQQIYNLFHPTDPVASRLEPLLSARFSN
LAPINVARYAKYPLGNGQPYHLMELIHTHPTLFGDHLPMPPTPVLRRLSEASVQSTVSGL
VDNIPLITMNALQQKWWGTKRLDYALYCPEGLTNFPMNALPHLFHASYWESSDVIAFILR
QVGHFDLALYGQQEDKDCSLFKPGQDKEKWMRKRTSVKLKNVAANHRANDVIVGEGCPQT
FIARFMYGPLDMITLTGEKVDIHMIRDPPAGEWTLLSTVVTDKTGRITYTLTDKQSVGCG
IYPVRAVVRGDHTSCNFHLAVIPPQTECVVFSIDGSFTASVSVTGRDPKVRAGAVDVVRF
WQDLGYLILYITGRPDMQQRKVVSWLAEHNFPHGLVFFSDGFSTDPLGHKAAHLHSLITE
HGVIFQAAYGSGKDINVYHNCGLPQKQIYAIGKISKKYNNLATTLNDGYASHLADLKQPG
AVRPARGNARLLVPRRLLASVSNSSSRGRR