| New model in OGS2.0 | DPOGS200471 |
|---|---|
| Genomic Position | scaffold10954:+ 4395-7186 |
| See gene structure | |
| CDS Length | 2229 |
| Paired RNAseq reads | 63 |
| Single RNAseq reads | 196 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006489 (6e-85) |
| Best Drosophila hit | ND |
| Best Human hit | pogo transposable element with KRAB domain (8e-11) |
| Best NR hit (blastp) | PREDICTED: similar to AGAP001049-PA [Acyrthosiphon pisum] (1e-130) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP001049-PA [Acyrthosiphon pisum] (5e-126) |
| GeneOntology terms | GO:0005575 cellular_component GO:0008150 biological_process GO:0003674 molecular_function |
| InterPro families | IPR009057 Homeodomain-like IPR004875 DDE superfamily endonuclease, CENP-B-like IPR007889 Helix-turn-helix, Psq |
| Orthology group | MCL11729 |
Nucleotide sequence:
ATGCCGCGAAACTATCAAAGAACAACAAGCCGACAGTCATGGAGCAAGGAATCAATGGAG
CAAGCCATTTCAGCATGGAAAGAAAATAAAATGGGTTGGGAATTGGCCGCAAAAACTTTC
GGGGTTCCACAAGCTACTTTACGAAGACATGCTCTAAATACGAATAAAACTTTAGAATCA
AGTAGTAAGGGACTCGGTAGGTTTAAGGCAACATTTCCACTAGAAATAGAAAGGGAATTA
GTGGACCACATCAAGTTTTTAGAGACTCGACTTTTTGGGTTGACGCTAACGGCAGTTCAG
GAGCTAGCCTATGAACTAGCAGAGAAAAACGGGTTTGATCATGCATTCAACAAGGATAAG
AAACGTGCTGGACAGGAGTGGTATGAAGGCTTTCTGAAAAGAAACCCGGATATTTCGTTA
CGGACTCCAGAACCAACTTCTGCAGCAAGAGCACAGGCGTTTAATAGACCTCAAGTAACA
AGATTTTTTCAGATTTATGAAGAATTTTTGAATACTCATAAGTTAGAACCTCAGCGAATT
TATAACATGGACGAAAGCGGGCTAACCACTGTCCAAAAACCGCAAAAAGTTTTGGCAACG
AAGGGCCGGAAACAAATTGGCTGTCTCACAAGTGCTGAAAGGGGTTCTAATGTGACAGTG
GTGTGCTGTACAAATGCCATTGGTTCATTTATTCCACCGTGCATGATTTTTCCTAGGAAG
AACATGAAAAATGAACTAATAGATGAAGCTCCTACTGGAACTCTAGGACTGGCACAAGAA
TCAGGATGGATGAACACAGATGTGTTTGTAAAATGGTTGAAACATTTCCAATCACACACG
AAAGCAAGTAAAGACGACCCAGTTCTGCTAATTTGTGATGGTCATGCAAGTCACAAAACC
ATTGAAGCTTTGACATATGCCAAAGAAAATGGCATTAATATGCTGTGTCTACCTCCACAC
TGCACACATCGAATGCAGCCCTTGGATGTTAGTATTTACGGACCACTAAAGACGTTTTAC
ACTCAAGAAATCTCTAAATGGTTAAAGAATCACCCAGGACGCGTTGTTACCCATTTACAA
ATTGGAGGTTTGTTTGCTCAAGCATATGGACAGGCTGCAACTGTACAAAATGCAAGTAAT
GGCATTAAAAGCACAGGTTTATGGCCAATAAATCCTGACATTTTTCCAGACTACATGTTT
GAACCAGCTGAGACTACAAATATTCCGTTGGATCAGGTCAACGATGCAGATACCGAACCT
GAACCTGAAGCTGAACCTGTCTACGCGCGTTTATCACCGGTTGAAAATGAAAACCCTACT
CCAACACAAGCTGATTTGGACAACATGAATGTTTCTACTCCAGAACCCTTAGAAACACAG
AATACAATGACACAAATGAATGCGATACCAGAAGACGAAGAACGACCACTGAATCCAGAT
ATTGGAGCTATTGTTTCTGAGGATTTAGTAACAAATGCGCAGGAATCTCTTACTGTTGAA
AGCTCTATAGCAACTCACGATGATGATGTGGAACCAGGCTCATCAAAGTCACTTCAGTTT
CCAATTGCGATTCTTTCACCAGCACCACAGGGGCAGTTCATTCGAGGCCAAGGCAAAAGG
AAACTCAACACTGCCAAAGGACATTGGCTTTTAACTTCAACTCCAAATATGGAAGAAGTT
ATTGAAAAAAATAGACCAAAAGATCCACCCGCAAAAAAGAAAAGACAGGTGAAAAAGGTG
CTTTTTGATGATGGTAAGTCCAATAGCATCAAAAAATCCACTGTCAAAAGCACAGTGGTA
GAAGCACCAAAAAAAAGACAGATGCCAACGAGGCAGCGTCGAACTGCTCAAACCATCGAT
TCCAGCTCTGATATTGAAGATATTGCTGCCGAAAACGAGGACGACGATGACTGCCCATGC
ATTTATTGCAATGACCTTTATTCGCGGTCCAAGCTGGGAGAAAGTTGGTTACGACCTTAC
AATGGCAAATGCGTGGCTATTATATCGGCGAGTCAAAATTTTAGGCACAACCTTGAAAAG
GATACCTCTTCGGCAGATTTTCGCCTCGAAGTAGCCGAGACTCTATGCAAACTTGGGAAT
AAAACAACAATCAAGAAACGCAAATCGACAGAGATTGATATCCAGGGCAAAAAGCATAAA
GATCCTGCGCAGCATACTCCACCAACTCCAACGCGGCAAGATCAAATCGGCACTGGCCAG
ATTGGTTAA
Protein sequence:
MPRNYQRTTSRQSWSKESMEQAISAWKENKMGWELAAKTFGVPQATLRRHALNTNKTLES
SSKGLGRFKATFPLEIERELVDHIKFLETRLFGLTLTAVQELAYELAEKNGFDHAFNKDK
KRAGQEWYEGFLKRNPDISLRTPEPTSAARAQAFNRPQVTRFFQIYEEFLNTHKLEPQRI
YNMDESGLTTVQKPQKVLATKGRKQIGCLTSAERGSNVTVVCCTNAIGSFIPPCMIFPRK
NMKNELIDEAPTGTLGLAQESGWMNTDVFVKWLKHFQSHTKASKDDPVLLICDGHASHKT
IEALTYAKENGINMLCLPPHCTHRMQPLDVSIYGPLKTFYTQEISKWLKNHPGRVVTHLQ
IGGLFAQAYGQAATVQNASNGIKSTGLWPINPDIFPDYMFEPAETTNIPLDQVNDADTEP
EPEAEPVYARLSPVENENPTPTQADLDNMNVSTPEPLETQNTMTQMNAIPEDEERPLNPD
IGAIVSEDLVTNAQESLTVESSIATHDDDVEPGSSKSLQFPIAILSPAPQGQFIRGQGKR
KLNTAKGHWLLTSTPNMEEVIEKNRPKDPPAKKKRQVKKVLFDDGKSNSIKKSTVKSTVV
EAPKKRQMPTRQRRTAQTIDSSSDIEDIAAENEDDDDCPCIYCNDLYSRSKLGESWLRPY
NGKCVAIISASQNFRHNLEKDTSSADFRLEVAETLCKLGNKTTIKKRKSTEIDIQGKKHK
DPAQHTPPTPTRQDQIGTGQIG