New model in OGS2.0 | DPOGS200471  |
---|---|
Genomic Position | scaffold10954:+ 4395-7186 |
See gene structure | |
CDS Length | 2229 |
Paired RNAseq reads   | 63 |
Single RNAseq reads   | 196 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006489 (6e-85) |
Best Drosophila hit   | ND |
Best Human hit | pogo transposable element with KRAB domain (8e-11) |
Best NR hit (blastp)   | PREDICTED: similar to AGAP001049-PA [Acyrthosiphon pisum] (1e-130) |
Best NR hit (blastx)   | PREDICTED: similar to AGAP001049-PA [Acyrthosiphon pisum] (5e-126) |
GeneOntology terms    | GO:0005575 cellular_component GO:0008150 biological_process GO:0003674 molecular_function |
InterPro families    | IPR009057 Homeodomain-like IPR004875 DDE superfamily endonuclease, CENP-B-like IPR007889 Helix-turn-helix, Psq |
Orthology group | MCL11729 |
Nucleotide sequence:
ATGCCGCGAAACTATCAAAGAACAACAAGCCGACAGTCATGGAGCAAGGAATCAATGGAG
CAAGCCATTTCAGCATGGAAAGAAAATAAAATGGGTTGGGAATTGGCCGCAAAAACTTTC
GGGGTTCCACAAGCTACTTTACGAAGACATGCTCTAAATACGAATAAAACTTTAGAATCA
AGTAGTAAGGGACTCGGTAGGTTTAAGGCAACATTTCCACTAGAAATAGAAAGGGAATTA
GTGGACCACATCAAGTTTTTAGAGACTCGACTTTTTGGGTTGACGCTAACGGCAGTTCAG
GAGCTAGCCTATGAACTAGCAGAGAAAAACGGGTTTGATCATGCATTCAACAAGGATAAG
AAACGTGCTGGACAGGAGTGGTATGAAGGCTTTCTGAAAAGAAACCCGGATATTTCGTTA
CGGACTCCAGAACCAACTTCTGCAGCAAGAGCACAGGCGTTTAATAGACCTCAAGTAACA
AGATTTTTTCAGATTTATGAAGAATTTTTGAATACTCATAAGTTAGAACCTCAGCGAATT
TATAACATGGACGAAAGCGGGCTAACCACTGTCCAAAAACCGCAAAAAGTTTTGGCAACG
AAGGGCCGGAAACAAATTGGCTGTCTCACAAGTGCTGAAAGGGGTTCTAATGTGACAGTG
GTGTGCTGTACAAATGCCATTGGTTCATTTATTCCACCGTGCATGATTTTTCCTAGGAAG
AACATGAAAAATGAACTAATAGATGAAGCTCCTACTGGAACTCTAGGACTGGCACAAGAA
TCAGGATGGATGAACACAGATGTGTTTGTAAAATGGTTGAAACATTTCCAATCACACACG
AAAGCAAGTAAAGACGACCCAGTTCTGCTAATTTGTGATGGTCATGCAAGTCACAAAACC
ATTGAAGCTTTGACATATGCCAAAGAAAATGGCATTAATATGCTGTGTCTACCTCCACAC
TGCACACATCGAATGCAGCCCTTGGATGTTAGTATTTACGGACCACTAAAGACGTTTTAC
ACTCAAGAAATCTCTAAATGGTTAAAGAATCACCCAGGACGCGTTGTTACCCATTTACAA
ATTGGAGGTTTGTTTGCTCAAGCATATGGACAGGCTGCAACTGTACAAAATGCAAGTAAT
GGCATTAAAAGCACAGGTTTATGGCCAATAAATCCTGACATTTTTCCAGACTACATGTTT
GAACCAGCTGAGACTACAAATATTCCGTTGGATCAGGTCAACGATGCAGATACCGAACCT
GAACCTGAAGCTGAACCTGTCTACGCGCGTTTATCACCGGTTGAAAATGAAAACCCTACT
CCAACACAAGCTGATTTGGACAACATGAATGTTTCTACTCCAGAACCCTTAGAAACACAG
AATACAATGACACAAATGAATGCGATACCAGAAGACGAAGAACGACCACTGAATCCAGAT
ATTGGAGCTATTGTTTCTGAGGATTTAGTAACAAATGCGCAGGAATCTCTTACTGTTGAA
AGCTCTATAGCAACTCACGATGATGATGTGGAACCAGGCTCATCAAAGTCACTTCAGTTT
CCAATTGCGATTCTTTCACCAGCACCACAGGGGCAGTTCATTCGAGGCCAAGGCAAAAGG
AAACTCAACACTGCCAAAGGACATTGGCTTTTAACTTCAACTCCAAATATGGAAGAAGTT
ATTGAAAAAAATAGACCAAAAGATCCACCCGCAAAAAAGAAAAGACAGGTGAAAAAGGTG
CTTTTTGATGATGGTAAGTCCAATAGCATCAAAAAATCCACTGTCAAAAGCACAGTGGTA
GAAGCACCAAAAAAAAGACAGATGCCAACGAGGCAGCGTCGAACTGCTCAAACCATCGAT
TCCAGCTCTGATATTGAAGATATTGCTGCCGAAAACGAGGACGACGATGACTGCCCATGC
ATTTATTGCAATGACCTTTATTCGCGGTCCAAGCTGGGAGAAAGTTGGTTACGACCTTAC
AATGGCAAATGCGTGGCTATTATATCGGCGAGTCAAAATTTTAGGCACAACCTTGAAAAG
GATACCTCTTCGGCAGATTTTCGCCTCGAAGTAGCCGAGACTCTATGCAAACTTGGGAAT
AAAACAACAATCAAGAAACGCAAATCGACAGAGATTGATATCCAGGGCAAAAAGCATAAA
GATCCTGCGCAGCATACTCCACCAACTCCAACGCGGCAAGATCAAATCGGCACTGGCCAG
ATTGGTTAA
Protein sequence:
MPRNYQRTTSRQSWSKESMEQAISAWKENKMGWELAAKTFGVPQATLRRHALNTNKTLES
SSKGLGRFKATFPLEIERELVDHIKFLETRLFGLTLTAVQELAYELAEKNGFDHAFNKDK
KRAGQEWYEGFLKRNPDISLRTPEPTSAARAQAFNRPQVTRFFQIYEEFLNTHKLEPQRI
YNMDESGLTTVQKPQKVLATKGRKQIGCLTSAERGSNVTVVCCTNAIGSFIPPCMIFPRK
NMKNELIDEAPTGTLGLAQESGWMNTDVFVKWLKHFQSHTKASKDDPVLLICDGHASHKT
IEALTYAKENGINMLCLPPHCTHRMQPLDVSIYGPLKTFYTQEISKWLKNHPGRVVTHLQ
IGGLFAQAYGQAATVQNASNGIKSTGLWPINPDIFPDYMFEPAETTNIPLDQVNDADTEP
EPEAEPVYARLSPVENENPTPTQADLDNMNVSTPEPLETQNTMTQMNAIPEDEERPLNPD
IGAIVSEDLVTNAQESLTVESSIATHDDDVEPGSSKSLQFPIAILSPAPQGQFIRGQGKR
KLNTAKGHWLLTSTPNMEEVIEKNRPKDPPAKKKRQVKKVLFDDGKSNSIKKSTVKSTVV
EAPKKRQMPTRQRRTAQTIDSSSDIEDIAAENEDDDDCPCIYCNDLYSRSKLGESWLRPY
NGKCVAIISASQNFRHNLEKDTSSADFRLEVAETLCKLGNKTTIKKRKSTEIDIQGKKHK
DPAQHTPPTPTRQDQIGTGQIG