| New model in OGS2.0 | DPOGS200262 |
|---|---|
| Genomic Position | scaffold1138:+ 16163-22985 |
| See gene structure | |
| CDS Length | 2775 |
| Paired RNAseq reads | 1491 |
| Single RNAseq reads | 3824 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007219 (0.0) |
| Best Drosophila hit | CG30421 (1e-164) |
| Best Human hit | ubiquitin carboxyl-terminal hydrolase 43 (4e-89) |
| Best NR hit (blastp) | PREDICTED: similar to CG30421-PA isoform 1 [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG30421-PA isoform 1 [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0006511 ubiquitin-dependent protein catabolic process GO:0004221 ubiquitin thiolesterase activity |
| InterPro families | IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 |
| Orthology group | MCL11216 |
Nucleotide sequence:
ATGTCAGCTAATAATTTATCAACAGTTTTAAAATCATGTTCGGAGAGTGAACTTATAAAC
GAAGTTGCGGAAGCAAATATGACATCAAAACAGGTAGAAGGATCCCGATTAAAACGTACC
TTTACGTTACCTCGTAATCCCTTTGGGACATCGAAGGCCACTTCAAGTAAAAATAAGGCC
AATGAGAATGAAAGTAAGCCTACTAGTGGAAAGAATACAATGAGTGTTAATCAAAAAGAT
GAGGGAGGTATGGAAAGGAAGTTATTTAGAAGGCCTTCATGGAAGATATTTTTGAACAAA
ATCGCTCAACATATGACTACAGTGAACATTTCAGGCGTAAAATCTCAACCAGTTATACCA
CATACCGAAAGAGTACCTTGCAGTGGAGAGCCGCCATGGCCGCCTGGAGCCGTCCCAGCA
GCCACTGGCATCAAGAATCACGGCAATACTTGCTACATGAATGCTGTATTACAATGCCTC
TCTCATACAGATGTTATTGCTGAGTATTTCGTTTTAGAACATTATAAGATTGATTTGCAA
AAAAGAAATAAGATAAATTCCAAAAAATATGGTACACGGGGTGAGGTCACCGAGCAACTG
GCAGCTTTACTAAAGGCACTATGGTCATGTCGATACACATCAGATATGAGTGTATCTTTT
AAGGCAGCGGTGGAACGGCACGGAACACAATACAGAGGACACAGTCAGCATGATGCACAG
GAATTCCTTTTTTGGCTATTGGATAAAGTTCATGAGGATTTGAATACAGCTACTAAGAAG
AAATATAAGACAATCAAAAATACAGTAGGTAAATCTGATGAGGTGGTGGCAGCAGAGACG
TTGGCGAACCATGCTCGTAGGAACAGTTCTTTTGTGCAGGCTGTGTTTCAAGCACAGTAC
AGATCAGCCCTTACATGTGCGAAGTGCGAGCGTACATCTTGTACATTTGATCCGTTTCAT
TGTGTGAGTGTTCAACTTCCAACGCGACCAGCCACAGCACAACCCTCACCGTTACCTGTC
AATGTCGTGTATGTTAATCAACAACCTCGCCAAGTGCGTATTGGAGTGGAGCTTCCTCCT
AACTCGACAATGGATGACCTCCGAACCGCTCTGAACTCGGATACTGGCATTGATAGAGAT
AATATCATACTGGCTGAGATAAATGAGACCGGTTGGAGCACTGCTCGCGCCGGTTGGGAG
GCAGCTGGTATAGACGCAGGCGCCCTATACTGTCTAGAGGCGCCTCCTCTTCTTCAGACA
CCCACTGCACCATATCTCCTGCTACTATGGGTCAATCTGCTGGAAGGAGATCGTTTCGGT
TCTCCATACGCTATGCAAGTTCCAAGAGAGATATCATACGAAGATCTTCAGAAACTCATG
TTGAAAGAGATGTGTCAAGTGATAGCTGAGAATCTACCTCATCCCCTGTTTGCTTTGGAT
GTCGAACAAGCACTGTGCGCACACGACAAATATCCTCATCTTAGACTCGAACTGTTATGG
GATCCTGCTCATAGGGACAGTATAATCCGTGAGTCGAGCGAGTCGTGTGAGGTGCACGTG
TCCGCGGTGCAACCCGGGCCGCTCACACTACACGCGTGTCTACAACACTACACGAGGGCG
GAGCAGCTGGCGCAGGAGGACGCCTGGAGATGTCCACAGTGCCAGAGATATATGCCGGTC
GTAAAAACTCTTGGTCTATGGTCACTACCTGATGTTTTAGTCATTCATCTGAAGAGATTT
AGACAACAAGCCAAATGCCGCACCAGTACAAAACTGACCACAATGGTAGAGTTTCCTATC
AACGACTTTGATATGACACCCCACCTCGTACGTCGGAACCAAGGTAATGTGGAGTCGCCC
GGACATTCCCGGTCGCCTCGACGGAGACATTCGAAAACGCCGGCTACTCATGAAAATATA
TATGATCTTTACGCTATATGCTATCACCACGGAGATGATTTAGAAACCGGTCACTATACA
GCAGCGTGTAGAAATCCATACGATAGGCACTGGTACAAATTTGACGATTCCAAGGTCACC
CGAGTAGATGATGAGAACAAGTACTCGGAACTGGTGAATAACTCTGCCTACATGCTGTTC
TACAGACGGAAGAAACCGCATGTCGTCCATTCGTGTTCGACGGAAGACAATGAACATTGG
GCCTTACGTATGCCAAAATACGTGAAGCCGGTCGGAGAACATCTCAACGAAATAGCAGAG
ATCAAGGAAGAAAATGTCGATGATACTAAAACGGCTTCCAAAGAAACTTTACAGCTCGAA
TCACCGACCGTAACGCCGTCTAGAAGTATATCTAGTCTATCCGACAAGACGGAGAGTCCC
ACCAAGCAGCCCATCGTTATACACAGCACCACAATGCAATCTCCAACATTACAGCGACCG
TTAATAGTCGAAGTTAACGGTGTTGCGAACGACGACCTAAGCGATTATGAAAACGAATCG
AGTATGCCAATTGAGCCGTACATACATAAAGATGTACATGTCAATCCTAAAATGACCCCA
GTGGATACAAGGCGGCCCAGGTCAGTAGATTACCCCGCCAAGGCCAGTACCTCGCCGTCG
TCCAGGGATTCGAATAGGAACTATGAAAGTTCTCCACTGGTTGCTAGCATCAATGGAGTC
GAATATCATCCCACCACCGAGGATCTGATGCTGTCCATGTTCCAGGAGTCGAAATACATA
GTGCCGAGACATATGACAGGGGAATCCCACAGGACAGGTGAGAAATCTGTTTGGAAAACT
CGAATATCCACGTGA
Protein sequence:
MSANNLSTVLKSCSESELINEVAEANMTSKQVEGSRLKRTFTLPRNPFGTSKATSSKNKA
NENESKPTSGKNTMSVNQKDEGGMERKLFRRPSWKIFLNKIAQHMTTVNISGVKSQPVIP
HTERVPCSGEPPWPPGAVPAATGIKNHGNTCYMNAVLQCLSHTDVIAEYFVLEHYKIDLQ
KRNKINSKKYGTRGEVTEQLAALLKALWSCRYTSDMSVSFKAAVERHGTQYRGHSQHDAQ
EFLFWLLDKVHEDLNTATKKKYKTIKNTVGKSDEVVAAETLANHARRNSSFVQAVFQAQY
RSALTCAKCERTSCTFDPFHCVSVQLPTRPATAQPSPLPVNVVYVNQQPRQVRIGVELPP
NSTMDDLRTALNSDTGIDRDNIILAEINETGWSTARAGWEAAGIDAGALYCLEAPPLLQT
PTAPYLLLLWVNLLEGDRFGSPYAMQVPREISYEDLQKLMLKEMCQVIAENLPHPLFALD
VEQALCAHDKYPHLRLELLWDPAHRDSIIRESSESCEVHVSAVQPGPLTLHACLQHYTRA
EQLAQEDAWRCPQCQRYMPVVKTLGLWSLPDVLVIHLKRFRQQAKCRTSTKLTTMVEFPI
NDFDMTPHLVRRNQGNVESPGHSRSPRRRHSKTPATHENIYDLYAICYHHGDDLETGHYT
AACRNPYDRHWYKFDDSKVTRVDDENKYSELVNNSAYMLFYRRKKPHVVHSCSTEDNEHW
ALRMPKYVKPVGEHLNEIAEIKEENVDDTKTASKETLQLESPTVTPSRSISSLSDKTESP
TKQPIVIHSTTMQSPTLQRPLIVEVNGVANDDLSDYENESSMPIEPYIHKDVHVNPKMTP
VDTRRPRSVDYPAKASTSPSSRDSNRNYESSPLVASINGVEYHPTTEDLMLSMFQESKYI
VPRHMTGESHRTGEKSVWKTRIST