| New model in OGS2.0 | DPOGS213402 |
|---|---|
| Genomic Position | scaffold163:+ 72438-74673 |
| See gene structure | |
| CDS Length | 1002 |
| Paired RNAseq reads | 419 |
| Single RNAseq reads | 1212 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009138 (3e-86) |
| Best Drosophila hit | mitochondrial ribosomal protein L39 (7e-84) |
| Best Human hit | 39S ribosomal protein L39, mitochondrial isoform b (5e-49) |
| Best NR hit (blastp) | mitochondrial ribosomal protein L39 [Glossina morsitans morsitans] (1e-93) |
| Best NR hit (blastx) | mitochondrial ribosomal protein L39 [Glossina morsitans morsitans] (3e-90) |
| GeneOntology terms | GO:0006435 threonyl-tRNA aminoacylation GO:0004829 threonine-tRNA ligase activity GO:0005762 mitochondrial large ribosomal subunit GO:0003735 structural constituent of ribosome GO:0006412 translation GO:0000166 nucleotide binding |
| InterPro families | IPR015552 Ribosomal protein L39, mitochondrial IPR012947 Threonyl/alanyl tRNA synthetase, SAD IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain |
| Orthology group | MCL15560 |
Nucleotide sequence:
ATGATATATATATCTAGGTGTTTTCGATTGAACACCAGTACAAAAAGTGTCATAAAGCGA
TGTTTAAGTTCACAAGAAGCTATTGAACGTCGGCATCATCTCTTCATATTAGAAAAAAAA
CGTCAACTCGATACTGTCGGTCGTATTGAAAAAATTGAAGTAAAATACAAAGGTATACCC
AAAGAATGTACCCTAGTGATGAATAAAGATATATCAACACCGTACGAATGTGCGAGACAT
TTCAGTGAGTGGCACATGGAGAGCAGTGCACTCGCATTGGTGGATGGCACAGTGTACTGG
GATATGCACAGACCACTCACAGGAAATTGTACCTTAGAGTTTCAAAGCTTTAATATAGCG
GAACCACAGCAAGTCAATAAGGCCTTTTGGAGAACATGCTCCTTGGTGCTGGGAGCCTGT
GCCACAGCGGCTTTCAAGGACTCGGTGCCAGTACACCTGCATAGCTTTCCCGGACCTGAC
ATCCGCAGCGGCTCATTCATTTATGACATAGATCTGCCGTCCTTACCTGACTGGAAGCCC
ACACCTCAAGAGCTCTACACGCTAAGTGCAGAGTATGTACAATTATGTCGAAAAAAGATT
AATTTGGAACGGCTAGATGTATCAGAGGAGCTTGCTTTAGAAATGTTTGTAGATAATGAA
CACAAAGCAAAGCAAATACCAAGTATAGCAAGAAATAATGGGAAGGTAACTCTATACAAG
GTGGACAAACACATTGACATATCCAAGGGACCAATGATCAGCAACACGGGACAGATTGGG
AGAGTCACCATCACCTCAGTACACAAGCTGACAGGAGGTGGTGTGAGTGATCCACCGCAG
CTGTACAGGTTCCAGGGTGTGGCGCTCCCGACAGGAGTCATACTGAATCACTTCGCCTTC
TCAATACTCACAGATAGAGCTAAGAAATTGAACCCTGCTCGGTCTCCGATGAGTCCCCTC
AGTGAAGCTCATTCTCAAGACAAGGCCGCAGCACGAGTGTAA
Protein sequence:
MIYISRCFRLNTSTKSVIKRCLSSQEAIERRHHLFILEKKRQLDTVGRIEKIEVKYKGIP
KECTLVMNKDISTPYECARHFSEWHMESSALALVDGTVYWDMHRPLTGNCTLEFQSFNIA
EPQQVNKAFWRTCSLVLGACATAAFKDSVPVHLHSFPGPDIRSGSFIYDIDLPSLPDWKP
TPQELYTLSAEYVQLCRKKINLERLDVSEELALEMFVDNEHKAKQIPSIARNNGKVTLYK
VDKHIDISKGPMISNTGQIGRVTITSVHKLTGGGVSDPPQLYRFQGVALPTGVILNHFAF
SILTDRAKKLNPARSPMSPLSEAHSQDKAAARV