| New model in OGS2.0 | DPOGS205054 |
|---|---|
| Genomic Position | scaffold2402:+ 29383-30929 |
| See gene structure | |
| CDS Length | 756 |
| Paired RNAseq reads | 753 |
| Single RNAseq reads | 2173 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA006800 (1e-100) |
| Best Drosophila hit | CG6843 (2e-78) |
| Best Human hit | corepressor interacting with RBPJ 1 (4e-44) |
| Best NR hit (blastp) | GK10376 [Drosophila willistoni] (1e-90) |
| Best NR hit (blastx) | GK10376 [Drosophila willistoni] (9e-82) |
| GeneOntology terms | GO:0006397 mRNA processing GO:0045449 regulation of transcription GO:0016607 nuclear speck GO:0005634 nucleus GO:0008380 RNA splicing |
| InterPro families | IPR019339 CBF1-interacting co-repressor CIR, N-terminal |
| Orthology group | MCL12169 |
Nucleotide sequence:
ATGGGGAAAGGTTTCAATAATTATATGTGTAAGAAGTTTTTTCATCCTGCATCCAGGGAC
AACTTGAAAAGAGTATGGATGGCTGAACAAAAGACTGATGCTTACAAAAAGAAACAGGAA
GAGTTAAGAGTACAGTATGAGAAAGAACAAGAACTTCATGAAAATAAAGCCCTTCTGAGC
AAGGATAGTAAAGACAAACTAAGCCTAAATTTTATGTATGAACCACCACCAGGTGTTAAA
AAGGAGAGAGAACGTGAGGATAATGAGCCAGAGTATAAGTTTGAATGGCAACGGAAATAC
AATGCACCAAGAGAAAGCTATTGTAAAGGTGATAATGAAATCAGAGATCAGCCTTTTGGA
ATTCTAGTGAGAAATGTAAGATGTATAAAATGCCACAAATGGGGACATATTAACACAGAC
AAGGAATGTTCAATGTATTCTCTCTCAATGAGTGAAGCAAGAGCATTACAAGCATCAGCA
TCAGCACCTGAAACTGAAGAAGAGAAGCCAGATGTACCAACCCTTATGCAACAAATGAGG
GACACAGGACTTGTTATGAAAGCAGCGGCAATGCCACTTTCTGCTGGGAAGATAGTTGAT
AATGATCCATCGTTCAGTGAAACTGATTTGATCAGCCAACTAACTAAGAAACAGAAGAAA
AAGTTGTTGAAAAAATTGGAAAAACTAGAAAAGAAGAAAGAAAAGAAGCAGAAACACAAA
TCAAAATACTTAATAAAAAAACTTGTTTCATTATGA
Protein sequence:
MGKGFNNYMCKKFFHPASRDNLKRVWMAEQKTDAYKKKQEELRVQYEKEQELHENKALLS
KDSKDKLSLNFMYEPPPGVKKEREREDNEPEYKFEWQRKYNAPRESYCKGDNEIRDQPFG
ILVRNVRCIKCHKWGHINTDKECSMYSLSMSEARALQASASAPETEEEKPDVPTLMQQMR
DTGLVMKAAAMPLSAGKIVDNDPSFSETDLISQLTKKQKKKLLKKLEKLEKKKEKKQKHK
SKYLIKKLVSL