| New model in OGS2.0 | DPOGS202627 |
|---|---|
| Genomic Position | scaffold822:- 49574-55063 |
| See gene structure | |
| CDS Length | 1068 |
| Paired RNAseq reads | 1103 |
| Single RNAseq reads | 3125 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008311 (4e-94) |
| Best Drosophila hit | checkpoint suppressor homologue, isoform A (1e-35) |
| Best Human hit | forkhead box protein N3 isoform 1 (3e-31) |
| Best NR hit (blastp) | PREDICTED: similar to checkpoint suppressor 1 [Apis mellifera] (4e-56) |
| Best NR hit (blastx) | PREDICTED: similar to checkpoint suppressor 1 [Apis mellifera] (2e-50) |
| GeneOntology terms | GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0043565 sequence-specific DNA binding GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR001766 Transcription factor, fork head IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR018122 Transcription factor, fork head, conserved site |
| Orthology group | MCL16444 |
Nucleotide sequence:
ATGGCGCCAATGCGCGGCGAACGCGGCGGTTCACCGGCGAGGGGTGCTCGAGCGTCCCTG
CCCCTGCCGCGGCGTCTGATCAGACAGATAGCGAGACATGTGGCGTCCAGCGGGAGGTCG
CTTAGACGGCTGGAGGTCTCCGGCAGGGTTATTGACAACTTTGATGACATCGATGATGGA
TCCGATGAATCCGACATGGAGACACAGACGGCCGTTGCCTGCGCCGGTAACTCTGGTAAT
TTACCACCAGCTGATCATGATGACGATCTCACCAGTCTCAGTTGGTTGCAGGACAAGAAT
TTACTGAGCGGAATAAATCTAACTAAAAGTGACATAGAGGACAGCAAACTGATCAGCAGT
CAGGTGGTTGTGAAAACAGAGCCATCTATAACTCCGCCGCCGTCGTCGCGAGTCCCCTCC
CCTCCCCGCACCCCCTGTAAAGCTCCCCCCTCCCCTCCCGCCGTGAACACCCACACCAAG
CCTCCCTACTCCTTCTCCTGCCTCATCTTCATGGCGATAGAAGCCGCCCCAGCCAGGGCT
CTCCCAGTTAAGGAGATATACGCCTGGATAGTCAGACACTTCCCATACTTCAAGCACGCA
CCACAGGGCTGGAAGAACAGCGTCAGGCATAATCTATCATTGAACAAATGCTTCCATAAG
GTGGCAGCGGCTCCTGGGTTAGGGAAAGGTTCGCTTTGGACTGTCGACCCTCAGCACCGA
TCGTCTCTTCTTCAGGCCTTCGGTCGCCAGCCTGTGCCTCCGGTGGAGGTGGAGGAGCAA
GAGACGTCGACCAGTGTAAAGAACACTCCAGACCCCCAACTGTTCCCGTACCTGGCCCGC
AGATTGGCCGACGCCCGTTCCCCTCCCGGCGCCGACGAGTACCTCGCCGCGGCCACTGTA
CTAGCCATGAAGTATGGACCCGCTGTACTAGACCAGCTCCCTCCGGAGGCTCACCTGGTT
ATATCTCGGTGTGCTCGTGACGAACACTCGTATAGTGGCGGCGAGGAGCGGCGTACGGCC
GAGGCCCTCCTCAACCTGGCCGGGGTCAGACCTCACGCCCCCAGCTAG
Protein sequence:
MAPMRGERGGSPARGARASLPLPRRLIRQIARHVASSGRSLRRLEVSGRVIDNFDDIDDG
SDESDMETQTAVACAGNSGNLPPADHDDDLTSLSWLQDKNLLSGINLTKSDIEDSKLISS
QVVVKTEPSITPPPSSRVPSPPRTPCKAPPSPPAVNTHTKPPYSFSCLIFMAIEAAPARA
LPVKEIYAWIVRHFPYFKHAPQGWKNSVRHNLSLNKCFHKVAAAPGLGKGSLWTVDPQHR
SSLLQAFGRQPVPPVEVEEQETSTSVKNTPDPQLFPYLARRLADARSPPGADEYLAAATV
LAMKYGPAVLDQLPPEAHLVISRCARDEHSYSGGEERRTAEALLNLAGVRPHAPS