| New model in OGS2.0 | DPOGS211214 |
|---|---|
| Genomic Position | scaffold81:+ 116807-119261 |
| See gene structure | |
| CDS Length | 1338 |
| Paired RNAseq reads | 335 |
| Single RNAseq reads | 972 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003194 (9e-145) |
| Best Drosophila hit | mind bomb 1 (1e-47) |
| Best Human hit | E3 ubiquitin-protein ligase MIB1 (5e-104) |
| Best NR hit (blastp) | PREDICTED: similar to mindbomb homolog 1 [Tribolium castaneum] (2e-135) |
| Best NR hit (blastx) | PREDICTED: similar to mindbomb homolog 1 isoform 6 [Apis mellifera] (9e-123) |
| GeneOntology terms | GO:0001841 neural tube formation GO:0001947 heart looping GO:0005515 protein binding GO:0031410 cytoplasmic vesicle GO:0005737 cytoplasm GO:0016874 ligase activity GO:0005886 plasma membrane GO:0001756 somitogenesis GO:0007219 Notch signaling pathway GO:0007507 heart development GO:0045807 positive regulation of endocytosis GO:0046872 metal ion binding GO:0045665 negative regulation of neuron differentiation GO:0001701 in utero embryonic development GO:0008270 zinc ion binding GO:0001568 blood vessel development GO:0004842 ubiquitin-protein ligase activity |
| InterPro families | IPR002110 Ankyrin repeat IPR001841 Zinc finger, RING-type IPR020683 Ankyrin repeat-containing domain IPR013083 Zinc finger, RING/FYVE/PHD-type |
| Orthology group | MCL10161 |
Nucleotide sequence:
ATGCTGTCCAAGTTGCCTCGCCCGTGGATAGTCGACGACGCTAAGGATGACGGTTACACT
GCTCTACATCTGGCAGCATTCAACAACCACGCTGAGGCTGCCGAACTTCTGGTACGAGCT
GGAGCACGCCTGGACCTTCAGAACGCTAACCTTCAAACGGCTCTGTACCTCGCCGTTGAG
AGACAACACACACAAATAGTCCGCCTGCTGATAACTCATGGCGCTAATCCTAATATTTGT
GATAAGGATGGTGACACTCCTCTTCATGAGGCGCTACGTCACCACACTCTACAGCAGTTA
CGCAGGCTACAGGACACTCGTGATACCTCCCTGTTGGGAGGCATCGCTCACTCGTACGAT
AAGAAGTCTTCCGCTTCCATCGCATGCTTTCTTGCAGCTAATGGCGCTGACCTGACAATC
AAGAATAAGAAAGGACAGACTCCGTTGAATCTGTGTCCCGATCCGAATCTCCGCAAAACG
CTAACAACATGCCGCAAAGAGAGCACTGGCGCGCCAAGTGAAAGCACACCAGAAAGCGAA
GATTCTGCTACAACTGCAACATTTACTCCACAACCAGGACCTAGCACGGCTCCAACTACG
GAAACTCCCACAGAAAATCCTCCAGCAGATCCCAGCACAGACGAATGTCTCGTTTGCTCT
GACGCCAAACCCGATACGCTGTTCCGTCCGTGCGGGCATATTTGTTGCTGCAATGTCTGT
GCAGCTAGAGTGAAGAAGTGCTTAGTGTGTCGTTCGTGCGTGTCATCAAGACAGCGTATC
GGTGAATGTGTGGTTTGTTCGGAGGCTCCGGCTACTGTGATGTTCCGTCCTTGTGGCGAT
GTATGCGCCTGCGCACAATGCGCTCCTCTGATGCGGAAGTGCGTTGAATGCCGCACGCCG
CTGCAGCCTCCTGCCGCTGCTTCTACTTCCGTCGCACCCGTAGCACCTCTCGCACCGGCT
GTGCCAGCTCCGGTTGCCGCACCTGTACCCTCCCCACCTGCAACAGCCATCGTAGCCGCA
GACGCCCAGCAAAATGAAGGTGGAGAAAGCAGCAATCTGGCTCAATTGCAGGTCAATAAA
GGTCAACCAGCACCAGCCCCCGCCGCGCCGCATCACCTCAACAATGGCAGCCGCTCGCAA
CACGCACCAGCAGACGTACAGAAGTTGCAGCAGCAACTCCAGGACATTAAGGAACAGACT
ATGTGCCCAATATGCTTGGATCGTCTCAAGAACATGATCTTCCTCTGCGGGCACGGGATG
TGCCAGATGTGCGGAGACCGTATCACCGTATGCCCCATATGCCGAAAACAAGTCGAGAAA
AGAATACTGCTCTATTAA
Protein sequence:
MLSKLPRPWIVDDAKDDGYTALHLAAFNNHAEAAELLVRAGARLDLQNANLQTALYLAVE
RQHTQIVRLLITHGANPNICDKDGDTPLHEALRHHTLQQLRRLQDTRDTSLLGGIAHSYD
KKSSASIACFLAANGADLTIKNKKGQTPLNLCPDPNLRKTLTTCRKESTGAPSESTPESE
DSATTATFTPQPGPSTAPTTETPTENPPADPSTDECLVCSDAKPDTLFRPCGHICCCNVC
AARVKKCLVCRSCVSSRQRIGECVVCSEAPATVMFRPCGDVCACAQCAPLMRKCVECRTP
LQPPAAASTSVAPVAPLAPAVPAPVAAPVPSPPATAIVAADAQQNEGGESSNLAQLQVNK
GQPAPAPAAPHHLNNGSRSQHAPADVQKLQQQLQDIKEQTMCPICLDRLKNMIFLCGHGM
CQMCGDRITVCPICRKQVEKRILLY