| New model in OGS2.0 | DPOGS211216 |
|---|---|
| Genomic Position | scaffold81:+ 127556-128946 |
| See gene structure | |
| CDS Length | 1047 |
| Paired RNAseq reads | 2896 |
| Single RNAseq reads | 7991 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003196 (0.0) |
| Best Drosophila hit | VhaAC39 (0.0) |
| Best Human hit | V-type proton ATPase subunit d 1 (1e-160) |
| Best NR hit (blastp) | RecName: Full=V-type proton ATPase subunit d; Short=V-ATPase subunit d; AltName: Full=Vacuolar proton pump subunit d; AltName: Full=V-ATPase 40 kDa subunit; AltName: Full=M40 (0.0) |
| Best NR hit (blastx) | RecName: Full=V-type proton ATPase subunit d; Short=V-ATPase subunit d; AltName: Full=Vacuolar proton pump subunit d; AltName: Full=V-ATPase 40 kDa subunit; AltName: Full=M40 (0.0) |
| GeneOntology terms | GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism GO:0015992 proton transport GO:0015986 ATP synthesis coupled proton transport GO:0008593 regulation of Notch signaling pathway GO:0007035 vacuolar acidification GO:0005886 plasma membrane |
| InterPro families | IPR016727 ATPase, V0 complex, subunit D IPR002843 ATPase, V0/A0 complex, subunit C/D |
| Orthology group | MCL13548 |
Nucleotide sequence:
ATGAAGGGGTGCATTTTCAATATCGACGCTGGTTATTTGGAAGGATTGTGTAGAGGTTTC
AAGTGTGGTATTCTGAAACAATCAGATTACTTGAATTTGGTACAATGCGAAACATTAGAA
GATTTAAAACTTCATTTGCAAGGAACCGACTATGGTACATTCTTAGCTAATGAACCCAGC
CCCCTCGCTGTGTCAACTATTGATGATAAGCTCCGTGAAAAACTTGTTATTGAGTTTCAA
CATATCAGGAATCACTCTGTAGAGCCGATGTCTACTTTCCTGGACTTCATTACCTACAGT
TACATGATTGATAACATTATTTTATTGATCACCGGTACTCTTCACCAGAGACCCATATCT
GAGTTGATCCCCAAATGCCACCCTCTGGGCTCGTTTGAACAGATGGAAGCCATCCATGTT
GCTGCAACTCCTGCCGAGTTGTACAATGCTGTACTGGTTGATACTCCACTCGCTCCATTC
TTTGTGGATTGCATCAGTGAGCAAGACTTGGATGAAATGAACATTGAGATCATCCGTAAC
ACTCTGTATAAAGCTTACTTAGAAGCTTTCTATGAATTCTGCAAGCAAATTGGCGGAACA
ACTGCTGATGTCATGTGTGAAATATTAGCTTTTGAAGCTGATCGTCGTGCAATTATCATT
ACCATCAATTCCTTTGGTACTGAGTTGTCTAAGGATGACCGAGCTAAGTTGTACCCTCGC
TGTGGCAAGCTGAATCCTGACGGATTGGCTGCTCTGGCTAGAGCTGATGATTATGAGCAA
GTTAAGGCTGTGGCAGAATACTATGCTGAATATTCAGCACTGTTTGAAGGCGCTGGAATG
AATGTTGGTGACAAAACATTGGAAGATAAATTTTTTGAACACGAGGTCTCCTTAAACGTT
ATGGCCTTTTTGCAACAATTCCACTTTGGAGTTTTCTATTCCTACCTCAAGCTCAAAGAA
CAGGAGTGCAGAAACATTGTGTGGATCAGCGAATGCGTTGCTCAGAAACACCGAGCTAAA
ATTGACAACTACATTCCTATTTTCTAG
Protein sequence:
MKGCIFNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPS
PLAVSTIDDKLREKLVIEFQHIRNHSVEPMSTFLDFITYSYMIDNIILLITGTLHQRPIS
ELIPKCHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRN
TLYKAYLEAFYEFCKQIGGTTADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPR
CGKLNPDGLAALARADDYEQVKAVAEYYAEYSALFEGAGMNVGDKTLEDKFFEHEVSLNV
MAFLQQFHFGVFYSYLKLKEQECRNIVWISECVAQKHRAKIDNYIPIF