| New model in OGS2.0 | DPOGS211217 |
|---|---|
| Genomic Position | scaffold81:+ 134895-135940 |
| See gene structure | |
| CDS Length | 885 |
| Paired RNAseq reads | 369 |
| Single RNAseq reads | 1166 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002975 (8e-142) |
| Best Drosophila hit | mitochondrial ribosomal protein L15 (4e-104) |
| Best Human hit | 39S ribosomal protein L15, mitochondrial precursor (2e-80) |
| Best NR hit (blastp) | PREDICTED: similar to 39S ribosomal protein L15, mitochondrial [Tribolium castaneum] (4e-118) |
| Best NR hit (blastx) | PREDICTED: similar to 39S ribosomal protein L15, mitochondrial [Tribolium castaneum] (2e-124) |
| GeneOntology terms | GO:0006412 translation GO:0005762 mitochondrial large ribosomal subunit GO:0003735 structural constituent of ribosome |
| InterPro families | IPR005749 Ribosomal protein L15, bacterial-type IPR021131 Ribosomal protein L18e/L15 |
| Orthology group | MCL13928 |
Nucleotide sequence:
ATGGGTTCGCGGCAAATTACGGAAAAATCTTTAGCAATGCTGCGGTCATTGCCTAGAATA
TCTTTAGCTAATTTACGTGACAATCCAGGTTCAAGAAAAAATACAAAAAGAGGGAGAGGA
CAATATGGTGGTGACAAACATGGAGCTGGAAATAAAGGCTCGAATCAAAGACAGAATTAT
ATGAGACTTGGCTATGAAACTGGAAACAACCCTTTTTATCTCAGAATGCCTCATGAAAAC
TACTACAAGGGTCATCACCATAGAAGGGAATATCCTCCCATGTCATTACTACAATTACAA
AAACTCATAGATACAGACAGATTGGACACTGATAAACCCATTGACATAGCCAGTATAGTG
AAATCTGGTCTGTATAATTTTTTCCCCGACCAAAAACATTTTGGTTTAAACTTAACAGAT
GAGGGAGCTGACATCTTTGCTGCAAAGATTAATATAGAAGTGCAGTGGGCAAGTGAGCAG
GTAATTGCTGCTATAGAAAAGAACGGAGGAGTAATAACTACAGCATATTATGATCCGCAT
AGCTTACTTTTATTGAAGAACCCTAAGAAGTTTTTTGAGTCTGGACAAGCCATTCCCAGA
AGAATGATTCCACCTCCTGATGCCATCGAATATTATACAAGTGCAGAGATGAGAGGTTAC
TTAGCTGATCCAGAGAAAATTTCAGAAGACAGATTGAGGCTGGCTCAAAAATATGGATAT
GAATTACCCATTCTAGAAAATGATAGCAACTATAGTATGTTATGCGAAAGGAAAGATCCA
CGTCAAATTTTCTATGGACTAGAACCAGGATGGGTGGTTAATTTAAAAGACAAATGTATC
CTCAAACCTAAGGATGAAGAGTTACTCAGATTTTATGCATCATAA
Protein sequence:
MGSRQITEKSLAMLRSLPRISLANLRDNPGSRKNTKRGRGQYGGDKHGAGNKGSNQRQNY
MRLGYETGNNPFYLRMPHENYYKGHHHRREYPPMSLLQLQKLIDTDRLDTDKPIDIASIV
KSGLYNFFPDQKHFGLNLTDEGADIFAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPH
SLLLLKNPKKFFESGQAIPRRMIPPPDAIEYYTSAEMRGYLADPEKISEDRLRLAQKYGY
ELPILENDSNYSMLCERKDPRQIFYGLEPGWVVNLKDKCILKPKDEELLRFYAS