| New model in OGS2.0 | DPOGS209675 |
|---|---|
| Genomic Position | scaffold38:- 70231-83422 |
| See gene structure | |
| CDS Length | 2439 |
| Paired RNAseq reads | 2518 |
| Single RNAseq reads | 5872 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000708 (2e-114) |
| Best Drosophila hit | ND |
| Best Human hit | tetratricopeptide repeat protein 39B isoform 1 precursor (6e-71) |
| Best NR hit (blastp) | PREDICTED: similar to TPR repeat-containing protein C9orf52 [Tribolium castaneum] (1e-120) |
| Best NR hit (blastx) | hypothetical protein AaeL_AAEL004330 [Aedes aegypti] (9e-107) |
| GeneOntology terms | GO:0005488 binding |
| InterPro families | IPR019412 Outer membrane protein, IML2, mitochondrial/Tetratricopeptide repeat protein 39 |
| Orthology group | MCL15182 |
Nucleotide sequence:
ATGTTTTATGTGACAAGAATAGCGACGCGTCACGACGTGCTCGGCGAAGACGAGCTGGGG
AATCCGATCGTGATGCCGGAGTTTGTGGCAGCAGCAAGGACGCCGCCCAGCACACCGATG
GCTACGACCGAATTTATCCAAGAAAGAATGACGGGACCCACTGCTACAGAACAACAATTA
GATGCAACTACCGCTCTGGGGATTACGGCGGAGACACAATTCAATACATCAAATGGCGAA
CCGCAACCCAGTACGTCAGGATACCAACCTCAACGTGGACCAAGGAACCGTGACCGACGG
GACAGCTACTCTGGCATCGCTCCAAGAGCGGAACCGGAGGACACTGATAGTGATGAATTC
TTTGAAGCGGAAGATCATGGGTCTTCACCACCGAGCAGTCCAATAGTTCCCTGCAACCCT
TCAACAGCAATATCGACTGAGTTGACACTCTACTCGGCGCTGGGAGACTGTGAACGTGCT
CTTCAGCTCTTCTTCAACAATAATCTTGACGGAGCCATATCCATTATGACCCCGTGGAAA
GACGTATCGCTATACCACGCTCACGGTGCTGCCATTTTCGAGTTCATACCGGCGATGCTA
ACCCTAGATCCGGTTCAAATACAAAAAGCAAACGACGCTTTGAGACATACTTTCGAACTG
TGCTCACAACATCGCCGGAACTACAACTTTGTTCAGTCTATTGGAGCCATCATTAGGAGG
CCAAATTACGCGACTTATACTGAGGAAGAGGCACACGCTGAACTCATTCATGCTGAGGCA
GTGATGCTACAGGCTTGTATCGGAGCCCTCGAGAACGAAGATGTAGCGGGCTTAGTGAAA
GCCTCCTTCCGCATTAAATCGTCCTTTAACAGCTACAAGCAATGCGCTAAGATATTGTCG
CGTAAGGAATGGGAGAGTGCTGAATGTAAGGCTCACTTTGAGAGCGGCGTCAGACTCGGC
CTGGCGACGTTCGATGTCATGATATCACTGCTACCTCCCCGCCTGATAACACTCTTGGAG
TTTATAGGATTCAGCGCTAATAAGGAAAAAGGCATAGAGGATCTGAAGATGGAGGCCAAA
TCCCCAGGATTACGGTCTGTGCTCTGTTCACTGACTCTCTTGATCTATTATCTAGTTATT
GGACACTTTGCCGCTATTGTACCGGATTATTTTGCTACGGAACAAATGATTTCTAGAGGA
TTGGCGAGGTATCCGAACAGCGTGTGGTTTACGATGTTCAAAGCTCGGATGCTACTACTT
CGGGGTATGATCAACGAAGCGGTGGAATCGTATCAGATGGCGACTCACACTGAGAATCTA
TGGCCGCAACTAAAACATCTATGTTACTGGGAAATGATATGGGCATACGGAATAATGATG
GAATGGTCTCAAGCCGCGTGGTATGCGAGTAGACTAGGCGTGGAGAGTAAGTGGTCCCGC
ACTATATACATGTACACGGAGGCCGCCATGCACTTAGAGCGGGGGGACGGACTCACCACC
GACCAGAGGCGACACTGTGAACTACTACTCAGGAAGGCCACAAGCTACAAACAGAGAGTC
ATGGGTCGTTCGCTGCCAATGGAGAAATTCGTTATCCGTCGCTGCGAGAGATGGCTTCGT
CGCGGATACCTCACCCTGCCCGGCGTCGAGTTGATGTGTTTGTGGAACATGTTTCCATCA
CTCGCCGCCGAGCCTCACTACGCCGACAGAATGCTCAAACACATCGAAAAATTATGCGAC
GAAGTCGAAACAACCCTGAGGAGCAGACGGAGCGACTCGTCCAGCGACACTCCGGACTAT
GATAAGGAGGACCTTGCCGTGGTCAAATATCTGAACGGCAGTCTATTGGCAGCCATGTCC
TTGCCCAGGCTCGCGTTGAGACATCTCGAAGTGGTGCTGACGATGAAAGACGAAATTAAG
GACGGCACACATCTAGTACCTTTCACGGCTGTCGAGATAGCCATGTGCCACTACGCGCTC
GGCGACTCGTACCAGGCCGTGGATATATTACACGACGCGAGGAAAAAATACGCTGGTTAC
TTACTAGAAGCCAGACTACAGTTCCGCATACATTCGAAGCTGGAGTTGATAAACGCGGGT
GCAGCCAACACGGTTGTGGCTGGGACCACGGCTAGTGCTGTACCGATGGCCAGCGTCAAC
GTGCTCGCAGCTCGACCATCGACATCGACATCGTCATCCAGCAGACCAATCACTACATCC
AGAGAGGTCGTCGAGAACAGATCAGGCAGGATGACGACCAGGGAAGTTCTGAACACGATA
GCCGATTCAAGGGCAATAATGGCGGCCAGTTCGCATGTTAGAAACGAACCTGAAGAGATC
GCTCTGCAAAGAGCGAACCCAGGGCACGCGCACGTGAACGCGAACGCGAACACGAACGCG
AACACGAACGCGAACGCGAACTCGAACACGAATAGATGA
Protein sequence:
MFYVTRIATRHDVLGEDELGNPIVMPEFVAAARTPPSTPMATTEFIQERMTGPTATEQQL
DATTALGITAETQFNTSNGEPQPSTSGYQPQRGPRNRDRRDSYSGIAPRAEPEDTDSDEF
FEAEDHGSSPPSSPIVPCNPSTAISTELTLYSALGDCERALQLFFNNNLDGAISIMTPWK
DVSLYHAHGAAIFEFIPAMLTLDPVQIQKANDALRHTFELCSQHRRNYNFVQSIGAIIRR
PNYATYTEEEAHAELIHAEAVMLQACIGALENEDVAGLVKASFRIKSSFNSYKQCAKILS
RKEWESAECKAHFESGVRLGLATFDVMISLLPPRLITLLEFIGFSANKEKGIEDLKMEAK
SPGLRSVLCSLTLLIYYLVIGHFAAIVPDYFATEQMISRGLARYPNSVWFTMFKARMLLL
RGMINEAVESYQMATHTENLWPQLKHLCYWEMIWAYGIMMEWSQAAWYASRLGVESKWSR
TIYMYTEAAMHLERGDGLTTDQRRHCELLLRKATSYKQRVMGRSLPMEKFVIRRCERWLR
RGYLTLPGVELMCLWNMFPSLAAEPHYADRMLKHIEKLCDEVETTLRSRRSDSSSDTPDY
DKEDLAVVKYLNGSLLAAMSLPRLALRHLEVVLTMKDEIKDGTHLVPFTAVEIAMCHYAL
GDSYQAVDILHDARKKYAGYLLEARLQFRIHSKLELINAGAANTVVAGTTASAVPMASVN
VLAARPSTSTSSSSRPITTSREVVENRSGRMTTREVLNTIADSRAIMAASSHVRNEPEEI
ALQRANPGHAHVNANANTNANTNANANSNTNR