| New model in OGS2.0 | DPOGS214514 |
|---|---|
| Genomic Position | scaffold422:+ 10348-11790 |
| See gene structure | |
| CDS Length | 1443 |
| Paired RNAseq reads | 252 |
| Single RNAseq reads | 628 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010964 (0.0) |
| Best Drosophila hit | CG8257 (9e-100) |
| Best Human hit | probable cysteinyl-tRNA synthetase, mitochondrial precursor (1e-88) |
| Best NR hit (blastp) | PREDICTED: similar to cysteinyl-tRNA synthetase [Tribolium castaneum] (1e-129) |
| Best NR hit (blastx) | PREDICTED: similar to cysteinyl-tRNA synthetase [Tribolium castaneum] (1e-121) |
| GeneOntology terms | GO:0004817 cysteine-tRNA ligase activity GO:0006423 cysteinyl-tRNA aminoacylation GO:0005737 cytoplasm GO:0005524 ATP binding |
| InterPro families | IPR015803 Cysteinyl-tRNA synthetase, class Ia IPR014729 Rossmann-like alpha/beta/alpha sandwich fold IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding |
| Orthology group | MCL14777 |
Nucleotide sequence:
ATGCCGAATGGGAATCCTATTGGAGCGTACGTATACAATTGTGTTGCTGAACAAAGAGTT
CCTATAATATTAAATGATCCGACAATCGCTACATGGTACTCCTGTGGACCCACTGTATAT
GATTCAGCGCATATTGGACACGCATCCTGTTACGTAAAGTTAGACATTATTCAGAGAATA
TTAAAATCATTTTTTAATATCAAACTGGTCACGGCTATGGGAATTACTGATATTGATGAT
AAAATAATAAAAAAAAGTCAGGAGACTAAAACTGATTTTCGCACTGTAGCTAAGAAATAT
GAACATGAATTTTGGATTGATATGTCGAGTTTGAATGTTGAAAAGCCAATGATTATAACC
AGGGTGTCTGAACATATAGATACTATAGGACAATTCGTTCATAGCCTATTAGAATCCGGT
ATGGCGTATGCTGGCAAGGATGGTTCAATCTATTTTGATACCTCCAAGTTTCCAGATTAT
GGAAAGTTACAAAAGGTTCAAGATATCAGAGAACCAAGTAATGAATATAAGAGAAATAAA
ATGGATTTCGCCCTATGGAAAGGTTATAAGCCCGGTGAACCTTCATGGCCTATGAAATTT
GGTGACGGGAGACCAGGCTGGCACATTGAATGCTCAGCCATGGTCAGTAAAGTATTCGGA
ACCCAATTAGACTTCCATGCAGGTGGAATTGACTTGAGATTCCCACACCATGAGAATGAA
GAAGCCCAAGCCTGTGCTTTCCACAACACACGACAGTGGGCGAACTATTGGCTACATGTC
GGCCATCTTAATCTAAAGGAAACAAAAATGTCCAAATCGCTTAAGAACACAATTTTAATA
CCAGATATACTAGAAAAGTATAGCGCTGATGCATTTCGAATGGCATGTCTCATGTCTAAT
TACCGATATCCAATGGAATATAGCGATGACATAATGGACACTGCATCTGATATCTTGAAT
AAATTTAAATTCTTTTTGAAAGATGTCGAGGGTTATGCAAATAGGAATTCTGTTAGATGT
GGGGACTACAATGACAAGCTATTAGAGGAGTTACAGAGAGTTGAGGAGAGTAATATGGAA
GCTATGAGAAATGACTTTGATACGGCATCATGCATTAATTCATTAATGAATCTGGTATCT
TTAGTGAATAAAATTATTAAAGCGGATACAGGAGATTACACTCCTGTACCTGTGATTCTC
ATAGCCGAGTACATCGCCTTTGTTTTGAAAAGATTCGGTTTGAAGCTGACAGACGAGAGA
AGTGATATATCTAGTCCCTTGTTAGATACATTAGTAGAATTCAGACATACAGTAAGAAAG
AAGGCTTTGAGCGACAAAGATAAAACTCTTTTGAATGCTTGCGATGTTGTTCGTGATAAG
TTGAAGACAATGAAAGTCCAAATAAATGACAGCAAAGAGACTTCTTCATGGGTCGTTAAG
TAA
Protein sequence:
MPNGNPIGAYVYNCVAEQRVPIILNDPTIATWYSCGPTVYDSAHIGHASCYVKLDIIQRI
LKSFFNIKLVTAMGITDIDDKIIKKSQETKTDFRTVAKKYEHEFWIDMSSLNVEKPMIIT
RVSEHIDTIGQFVHSLLESGMAYAGKDGSIYFDTSKFPDYGKLQKVQDIREPSNEYKRNK
MDFALWKGYKPGEPSWPMKFGDGRPGWHIECSAMVSKVFGTQLDFHAGGIDLRFPHHENE
EAQACAFHNTRQWANYWLHVGHLNLKETKMSKSLKNTILIPDILEKYSADAFRMACLMSN
YRYPMEYSDDIMDTASDILNKFKFFLKDVEGYANRNSVRCGDYNDKLLEELQRVEESNME
AMRNDFDTASCINSLMNLVSLVNKIIKADTGDYTPVPVILIAEYIAFVLKRFGLKLTDER
SDISSPLLDTLVEFRHTVRKKALSDKDKTLLNACDVVRDKLKTMKVQINDSKETSSWVVK