| New model in OGS2.0 | DPOGS215866 |
|---|---|
| Genomic Position | scaffold1009:- 71533-74026 |
| See gene structure | |
| CDS Length | 1506 |
| Paired RNAseq reads | 335 |
| Single RNAseq reads | 857 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000414 (2e-177) |
| Best Drosophila hit | d4, isoform C (6e-07) |
| Best Human hit | PHD finger protein 10 isoform a (1e-09) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC012280 [Tribolium castaneum] (1e-85) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC012280 [Tribolium castaneum] (8e-81) |
| GeneOntology terms | GO:0005634 nucleus GO:0007399 nervous system development GO:0008270 zinc ion binding GO:0005515 protein binding GO:0046872 metal ion binding GO:0045449 regulation of transcription GO:0071564 npBAF complex |
| InterPro families | IPR019787 Zinc finger, PHD-finger IPR013083 Zinc finger, RING/FYVE/PHD-type IPR013761 Sterile alpha motif-type IPR001965 Zinc finger, PHD-type IPR010993 Sterile alpha motif homology IPR011011 Zinc finger, FYVE/PHD-type |
| Orthology group | MCL16896 |
Nucleotide sequence:
ATGTTAAAGTGCTATAAAGTAGCACCAAAGGATACAAAAGCGGATTTAAAACGTTGTCTC
AAAGAGAAAAGCATATATAAAGTCGATTATAAAGATAATGTAAGCTATAGAAACGCAGCT
AAGTGGCGAAAAAAACCTTCCCAAAACAAGAAAATGAGTTCCATTGCAAAAAGTGAAAGA
AGAATAATAACATCAGCGATAGCAACATTAATATATCAAGATCAAAGTTATTTGGAGAAT
GGTATTGCATTTGCTGATCTTGTAAGAGTAGCTTCGAATCAAGAATCAAAGTATACTAAG
AAGCAGCTGATAACAATAATAAACAAAGAGCTTATATCAGGCAGTCTGGTTAAGTTACCT
AATGGTACTTTAGCTCTTGGACCTGCAGATCATGACGGAGACAGTTCAGATAGTTTTAAA
TTTGAATATAATGATGCAAACACTAAGATGACATCATCAGCCAATTCATCTTGCCGATCT
TCCCCGCAAAGAATGAGAGGACGACCAAAGAAAAGGGGAGGTGGAGCTTCAAGTAACAGT
ACACACAGTAACAATCATAATTCAGGAGTTAGAGTAGGTGAAAGACGTAAAATGGCAAAA
AAAGTATTTGACCCATCTGATAACAATGTACCCAGCAAACGTAAGAGAGGACGTCCAGTG
GGATCGTTAAATAAAAGTACAATAAAAAAAAGGTTAATGATCGCTGGCAAAGACAAAGAA
GACACTCCACTGTCGGAAAGTCAACAGTCATTGGACGGGAGTGGGGATGAGATGAATAAT
GATGAACCATTGTCACATGAAACGTCAGGGGTGTGTACCGTGTGCTTGATACAGAAGACG
CGCGGTTCCAATGATAGATTGGTTGAGTGTAGGGATTGTAATAATAAAGCACATTTAAGT
TGCTTACAATCTGGATCCGGGATCCTTAAACCCAGACCGGATAACACCTGGCAATGTCCA
CACTGCAAGACTTGTGTGGTTTGCTGTGAAACAAATGATGCTGGTATATTGACTGTGTGT
AGTATATGCTCAGATTCTTATCATGCATTGTGTCACACGCCAAGAATACCTGAACGGCTC
AAGGCTTGGGATCAATGGGAATGCAATAACTGTTTAGAATCTCGTCCGTCAGCCGCCGCA
TCTCCAGGAATCCCAAATAACATAGAATTTACTGGAAAAGACTCAAGTTCAATGGACCCA
TTTCTGAAGCCACATGAATTAGATAGGGCACCTACTAAACTAAACAATGAAGTCCCAATA
GATCCAAAAATACCAGATATAAGTAATTGGAATGTGGACGATGTTTATGAGTATTTTAAA
CAGCATTTCCCTGAAGCTGCTCCCATTTTAAAGGATCAGGAATTTGATGGACAAGCATTG
AGTATGGCGAGACGAGCGGATATTGTTAGGGGTTTGGGCCTGCCTTTAGGTCCGGCATTA
GCGTTGTATAGAATCATAGTTAAATTACAAACAAGAAAAGATGATTGGACAATGTGTTGG
GGTTGA
Protein sequence:
MLKCYKVAPKDTKADLKRCLKEKSIYKVDYKDNVSYRNAAKWRKKPSQNKKMSSIAKSER
RIITSAIATLIYQDQSYLENGIAFADLVRVASNQESKYTKKQLITIINKELISGSLVKLP
NGTLALGPADHDGDSSDSFKFEYNDANTKMTSSANSSCRSSPQRMRGRPKKRGGGASSNS
THSNNHNSGVRVGERRKMAKKVFDPSDNNVPSKRKRGRPVGSLNKSTIKKRLMIAGKDKE
DTPLSESQQSLDGSGDEMNNDEPLSHETSGVCTVCLIQKTRGSNDRLVECRDCNNKAHLS
CLQSGSGILKPRPDNTWQCPHCKTCVVCCETNDAGILTVCSICSDSYHALCHTPRIPERL
KAWDQWECNNCLESRPSAAASPGIPNNIEFTGKDSSSMDPFLKPHELDRAPTKLNNEVPI
DPKIPDISNWNVDDVYEYFKQHFPEAAPILKDQEFDGQALSMARRADIVRGLGLPLGPAL
ALYRIIVKLQTRKDDWTMCWG