New model in OGS2.0 | DPOGS214912  |
---|---|
Genomic Position | scaffold1480:- 24699-28457 |
See gene structure | |
CDS Length | 336 |
Paired RNAseq reads   | 27 |
Single RNAseq reads   | 608 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010439 (2e-07) |
Best Drosophila hit   | CG11159 (5e-06) |
Best Human hit | ND |
Best NR hit (blastp)   | lysozyme-like protein 1 [Antheraea mylitta] (4e-07) |
Best NR hit (blastx)   | RecName: Full=Lysozyme; AltName: Full=1,4-beta-N-acetylmuramidase; Flags: Precursor (1e-06) |
GeneOntology terms   | ND |
InterPro families    | IPR000477 Reverse transcriptase IPR001916 Glycoside hydrolase, family 22 IPR023346 Lysozyme-like domain |
Orthology group | ND |
Nucleotide sequence:
ATGCGGTTCGTGAGTTTCTTAGTTTCTGTAATTTTATTATTAAACGTGAATTGTATTAGA
TATGAAACGAGGTGCAAGCTTGTTCGTGAATTACTCAAAGCGGGAATCCCAAACGACATT
TTTTTAGGGCAGTGGGTTTGTTTAGCAGAGAAAGTTAGCAATCGGGATACAAAAGCCTTT
GTAGTGTCACCGAGCGGCAAGAAGTCTTACGGGATATTTCAAATGGTGAAATCCTATGAG
AGCTCTTCTGTTTGGAAGGAAACATATGCCGGGGTACCACAAGGTGGCGTCTTGTCTCCT
TTACTCTTTTCTATATTCATAGATAATATTTCATAA
Protein sequence:
MRFVSFLVSVILLLNVNCIRYETRCKLVRELLKAGIPNDIFLGQWVCLAEKVSNRDTKAF
VVSPSGKKSYGIFQMVKSYESSSVWKETYAGVPQGGVLSPLLFSIFIDNIS