| New model in OGS2.0 | DPOGS203768 |
|---|---|
| Genomic Position | scaffold3239:- 15673-22627 |
| See gene structure | |
| CDS Length | 1683 |
| Paired RNAseq reads | 2088 |
| Single RNAseq reads | 7451 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013343 (2e-61) |
| Best Drosophila hit | CG10882 (4e-114) |
| Best Human hit | protein transport protein Sec24C (7e-96) |
| Best NR hit (blastp) | PREDICTED: similar to Sec24B protein, putative [Tribolium castaneum] (3e-138) |
| Best NR hit (blastx) | PREDICTED: similar to Sec24B protein, putative [Tribolium castaneum] (7e-136) |
| GeneOntology terms | GO:0030127 COPII vesicle coat GO:0005515 protein binding GO:0006886 intracellular protein transport GO:0006888 ER to Golgi vesicle-mediated transport GO:0008270 zinc ion binding GO:0015031 protein transport GO:0006810 transport |
| InterPro families | IPR006900 Sec23/Sec24, helical domain IPR006895 Zinc finger, Sec23/Sec24-type IPR006896 Sec23/Sec24, trunk domain IPR012990 Sec23/Sec24 beta-sandwich IPR007123 Gelsolin domain |
| Orthology group | MCL11663 |
Nucleotide sequence:
ATGGCAGAGACTATCGGCACGGAACAGGAGCCCCCCCTGCTGGACTTCGCAGCCCTGACG
GGGTCCCCCACCATGGGCCCGGTGAGATGCTGTCGCTGCAAGGCCTACATGTGTCCCAAC
ATGAAGTTCATAGACGGCGGCAGACACTTCAAGTGCGCCTTCTGCAAGGCCACCAGCGAA
GTGCCGATGGAGTACACGCAGTACATCACCAGCATGCAGCAGTACGGTCGCGTGCCGCCC
GAGATGGCGCTCGGCACTTACGAGATAGTCGCCACCAAGGAATACTGTCGGAACAACACC
CTTCCTAATCCTCCAGCTATAGTGTTCGTGATCGACGTCTCATACAACTCTATAAAGAGC
GGCCTGCTGCAAACTATATCCCCTCAGAGCACGTCGTACAATGAGCTGGGGCAGCTGTGC
AGCGCTGCAGGCGTGTGTGTCCAGATGTTCGTGTGTAACAACTCGTACGTCGACTGCGCC
ACCATCGGCCAGTTGGCGAGGCTCACCGGCGGACAAGTACACAAGTACACGTACTTCACT
TCGGACACGGACGGCCACCGTCTGATGTGGGACGTGTCGCGCGTGCTGTCCCGCCCGACC
GCTCACGACGCGGTCATGCGCGTGAGGACCAGCACCGGCGTGCGCCCCACAGACTTCTAC
GGACACTTCTTCATGTCCAACACCACGGACGTCGAGCTGGCCGCCATCGACTCGGACAAG
GCCATCGGCGTGGAGATCAAACACGACGACAAGTTGACGGCGGAGTCCGGCGTGTACATC
CAGGCGGCGCTGCTGTACACCCACCGCTCGGGCCAGCGGAGGCTGAGGGTCATCAACCTC
GCGCTGTCGCTCGCCCACCAGCTGGCGGATGTGTACAGATCCGCGGAACTGGACACCATC
GTAAACTTCCTCACTAAACAAGCCGTGTGGGCGCTCCGTGAGGCTACGCCCCGTCAGGTC
CGCGAGGGCCTCACAAGTCGCTGTGCTCGTTCGCTGGCCGCCTACCGACGTCACTGCGCC
TCGCCCTCGTCCGCCGGACAGCTGGTGTTGCCGGAAGCCATGAAACTACTTCCACTATAC
ACCAGCTGTGTGCTGCGGTCTGATGCTGTCGGCGGTGGGCCGGACATAACGTGCGACGAC
CGCTCGTGCGCCATGTACCGCGCGCTCACGGCGGACGTGTCCCTGTCGCTCGTGTACACC
TACCCTCGCCTGCTGCCGCTGCACGTGCTGCCCGACCAGGAGCCCGCCCCGCTCAGGGCC
TCCATAGACAAGATGTCCGAACACGGAGTCTATTTGTTGGAGAACGGAGTCCACATGTTG
ATATGGGTGGGGTCCCAAGCGCCGCTGGAGTTCGTGAGGGATGTGTTCGGAGCGAACTCG
CCGCAGGCCGTAGACGCCCGGGTGTGCGAGCTACCGGAAATAGACTCGCGAGTCGGCGCA
GCGGTGCGCAGGCTCGTGGACGACACCAGGCATAAGAGGAGGAACGCCATGAGGCTAACC
GTATTACGGCAGCACGACAAGCTGGAGACGGTGCTGCGTCAGCTTTTAGTGGAGGATCGG
GGGGGTAGACGGCGGGGCTTCCTACGTCGACTACCTCTGCCATATACACAAGGAGATACG
CGCCCTACTCTAGCGGCCCACGCTTTGGGAACACCTGTGGAAGTCCTTAAGATATCTGTC
TGA
Protein sequence:
MAETIGTEQEPPLLDFAALTGSPTMGPVRCCRCKAYMCPNMKFIDGGRHFKCAFCKATSE
VPMEYTQYITSMQQYGRVPPEMALGTYEIVATKEYCRNNTLPNPPAIVFVIDVSYNSIKS
GLLQTISPQSTSYNELGQLCSAAGVCVQMFVCNNSYVDCATIGQLARLTGGQVHKYTYFT
SDTDGHRLMWDVSRVLSRPTAHDAVMRVRTSTGVRPTDFYGHFFMSNTTDVELAAIDSDK
AIGVEIKHDDKLTAESGVYIQAALLYTHRSGQRRLRVINLALSLAHQLADVYRSAELDTI
VNFLTKQAVWALREATPRQVREGLTSRCARSLAAYRRHCASPSSAGQLVLPEAMKLLPLY
TSCVLRSDAVGGGPDITCDDRSCAMYRALTADVSLSLVYTYPRLLPLHVLPDQEPAPLRA
SIDKMSEHGVYLLENGVHMLIWVGSQAPLEFVRDVFGANSPQAVDARVCELPEIDSRVGA
AVRRLVDDTRHKRRNAMRLTVLRQHDKLETVLRQLLVEDRGGRRRGFLRRLPLPYTQGDT
RPTLAAHALGTPVEVLKISV