| New model in OGS2.0 | DPOGS205624 |
|---|---|
| Genomic Position | scaffold175:- 188355-189584 |
| See gene structure | |
| CDS Length | 894 |
| Paired RNAseq reads | 292 |
| Single RNAseq reads | 923 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001137 (6e-122) |
| Best Drosophila hit | Ts (2e-108) |
| Best Human hit | thymidylate synthase (8e-114) |
| Best NR hit (blastp) | thymidylate synthase isoform 1 [Bombyx mori] (3e-145) |
| Best NR hit (blastx) | thymidylate synthase isoform 1 [Bombyx mori] (3e-134) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0004799 thymidylate synthase activity GO:0005542 folic acid binding GO:0005625 soluble fraction GO:0006231 dTMP biosynthetic process GO:0007568 aging GO:0008168 methyltransferase activity GO:0009165 nucleotide biosynthetic process GO:0016740 transferase activity GO:0019088 immortalization of host cell by virus GO:0031100 organ regeneration GO:0042493 response to drug GO:0046078 dUMP metabolic process GO:0046683 response to organophosphorus GO:0048037 cofactor binding GO:0048589 developmental growth GO:0051216 cartilage development GO:0051384 response to glucocorticoid stimulus GO:0060574 intestinal epithelial cell maturation |
| InterPro families | IPR000398 Thymidylate synthase IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain IPR020940 Thymidylate synthase, active site |
| Orthology group | MCL11489 |
Nucleotide sequence:
ATGTCATTAAGCAATGGTTTTCATACACAACATGATGAATATCAATATCTAAACCTTATT
AGAGATATTATTAAAACAGGTGACAAACGTAATGACAGAACAGGTGTTGGAACCTTATCT
GTATTTGGATCAGTACAAAGGTATTCTTTAAAAAATAATACTCTGCCTTTACTTACAACA
AAACGAGTTTTTGTCAGAGGAGTTATAGAAGAACTTTTGTGGATGATATCCGGTTCGACT
GATAGTAAAAAACTAGCTAGCAAAGGTGTGCATATATGGGATGCGAATGGTTCCAGAGCT
TTTCTTGATAATTTGGGGTTCAAAGATAGAGAAGAAGGTGATCTTGGTCCTGTTTATGGT
TTTCAGTGGAGACACAGTGGTGCCAAATATATAGACGCTAAGACTGATTACACTGGACAA
GGAGTAGATCAGCTCCAAAATGTCATTGACACTATCAAAAAAAACCCTGGTGATAGACGT
ATAATAATGTGCGCATGGATTCCTGCTGACCTGAGCTTAATGGCTCTCCCACCTTGTCAC
TGCCTTGCACAATTCTATGTATCCAATGGAAAGCTGAGTTGTCTTTTGTACCAAAGAAGT
GCAGATATGGGTCTTGGAGTACCATTCAATATTGCCAGTTATTCATTGTTGACACATATG
ATTGCACATATCACAAATTTGGAGGCTGGTGAGTTTGTTCATACAACAGGAGATACCCAT
GTATATCTGAACCACATAGAACCATTAAATAAGCAACTTGAAAGAGAACCGAGACCCTTC
CCAACTCTAGAGTTTAAACGCAAAATTGATTCAATTGATGACTTTAAGTATGAAGACTTT
GTTGTTAAGAACTATAACCCTTACCCTAAGATAGACATGGAATTGGCTGTATAG
Protein sequence:
MSLSNGFHTQHDEYQYLNLIRDIIKTGDKRNDRTGVGTLSVFGSVQRYSLKNNTLPLLTT
KRVFVRGVIEELLWMISGSTDSKKLASKGVHIWDANGSRAFLDNLGFKDREEGDLGPVYG
FQWRHSGAKYIDAKTDYTGQGVDQLQNVIDTIKKNPGDRRIIMCAWIPADLSLMALPPCH
CLAQFYVSNGKLSCLLYQRSADMGLGVPFNIASYSLLTHMIAHITNLEAGEFVHTTGDTH
VYLNHIEPLNKQLEREPRPFPTLEFKRKIDSIDDFKYEDFVVKNYNPYPKIDMELAV