New model in OGS2.0 | DPOGS205625  |
---|---|
Genomic Position | scaffold175:- 182560-185062 |
See gene structure | |
CDS Length | 978 |
Paired RNAseq reads   | 50 |
Single RNAseq reads   | 197 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007089 (6e-16) |
Best Drosophila hit   | CG9609 (8e-25) |
Best Human hit | zinc finger protein 648 (9e-28) |
Best NR hit (blastp)   | transcription factor IIIA, putative [Aedes aegypti] (1e-40) |
Best NR hit (blastx)   | zinc finger protein, putative [Pediculus humanus corporis] (9e-47) |
GeneOntology terms    | GO:0003677 DNA binding GO:0045449 regulation of transcription GO:0046872 metal ion binding GO:0005634 nucleus GO:0008270 zinc ion binding GO:0005622 intracellular |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
Orthology group | MCL12156 |
Nucleotide sequence:
ATGCAAGAGCAAAATTTAGCCTCGAATAAAAAATACTCTTGCCCGTTTGATGGTTGTAAA
TCTGAGTTTAACCGACCATATAGATTAGCGCAACATCGTTTAGTTCATGTTAATGTAAAA
CCTTTTACTTGTTATGTAGCCAACTGTGACAAAGCCTACACAAGTAAAAGCCATTTGGAC
CGTCATGTGAACAGTGCACACAAAGAGAGTGAACTGGATATACTATACTGTTGCCCACAC
TGTATGAAAAAATATTGTAACCGACAGAATCTCAAACGTCATATAAAGGTGAGCCACATA
CAGAATAACAAACCATTTACCTGCGATGACTGTAAAGCACAGTTCAAAAAGAAAGATCAA
CTTGTGGCCCATATGTACCAACACAATGGTATTAAACCCTATAGATGTAACATATGCTCA
AAAGATTTTGTTACATTGTATAAAAGAAGAAAGCATATGAGAAACCACAGAACACATAAA
TGTGAACATTGCGATATGACATTTACAGGATGGATGGATCTGGTCAAACACAGAAGAGTA
GATCATGCATCACCTGAATATATTTGTAATGATTGTGGAAAAGTATTTAAAGAGAGATCG
CATATAATAAGACATGTAAAGAATCACTTGCCAGGAAATTCAGTAACAGCATTCTTCTGT
CCCTATGAAAATTGTCACAGGCATTACTCAAGGAACAGTAATTTAAAGCAGCACATTTTA
GTAAAGCATAAAGGTCAGACTTTTGATTGTACACTCTGTGGCGCGAAATTAACAACAAAG
GCCCGGCTAAACGACCACATTGATAGACATACTAGACCAGAAGTTATATTACGGATACCG
AAAACTTGTGAAACCGGCAGAAAAAAAAGAAAGGATGAAAACTCTATGAAATATGTCACC
GCTTTGAAATTGGCGGGAATAGTAAAAAATAAAATGGAAAAATGTATCGATAGCAAAACG
ATCAGAGATGACACTTAA
Protein sequence:
MQEQNLASNKKYSCPFDGCKSEFNRPYRLAQHRLVHVNVKPFTCYVANCDKAYTSKSHLD
RHVNSAHKESELDILYCCPHCMKKYCNRQNLKRHIKVSHIQNNKPFTCDDCKAQFKKKDQ
LVAHMYQHNGIKPYRCNICSKDFVTLYKRRKHMRNHRTHKCEHCDMTFTGWMDLVKHRRV
DHASPEYICNDCGKVFKERSHIIRHVKNHLPGNSVTAFFCPYENCHRHYSRNSNLKQHIL
VKHKGQTFDCTLCGAKLTTKARLNDHIDRHTRPEVILRIPKTCETGRKKRKDENSMKYVT
ALKLAGIVKNKMEKCIDSKTIRDDT