| New model in OGS2.0 | DPOGS205667 |
|---|---|
| Genomic Position | scaffold175:+ 190106-196479 |
| See gene structure | |
| CDS Length | 1569 |
| Paired RNAseq reads | 66 |
| Single RNAseq reads | 166 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001016 (2e-43) |
| Best Drosophila hit | CG14185 (3e-25) |
| Best Human hit | leucine-rich repeat-containing protein 56 (4e-16) |
| Best NR hit (blastp) | GE23228 [Drosophila yakuba] (2e-29) |
| Best NR hit (blastx) | GD14853 [Drosophila simulans] (4e-27) |
| GeneOntology terms | GO:0005515 protein binding |
| InterPro families | IPR001611 Leucine-rich repeat |
| Orthology group | MCL20316 |
Nucleotide sequence:
ATGCCTTTTCTTGAAGCACCAAGTGTAGATCTCGGTTCAGCTCCGCGTACACCGAGTGTT
GTTATATCACCAACACCTTCGGAGGTATCAAGTGCAAGTTCACCCGAACCTCAAAATGTC
CGAGCGACACCTCTCTTCAGAGCTTTAGCAATGAGACCACCTGAACCAGAGCAGCCTCCT
GGACAAGACGAATTAGAACGTAGATTACCGGGATATAGGAGAATTGTTATTCCACGTGAA
TTAACACTCATTGAACTGTTGAAACAATGCAGCGGTGTAAACACGGATGAAGAGGTACTT
TCAATACGTGAAGCTAAATTGCGGGTAGTAGCGGAGAGGGTGGGCTTACGACGTCTTCAC
GTGCTTGTTCCACATTTAAAATCTCTCATTCTAGATGGCAGCGCACTCACGTCGCTACGG
GATCTGGGCATTGGCTTGGTTCATCTGAAAAAATTAAGCGTCAGCCGTTGTGGATTAACA
TCGTTGGACGGTGTGTGGGGTCTGAATTCCTTACGAGAACTTCACGCGTCTGGGAATCGT
TTGAAGGACTTTCATCAATTGGCGGCTCTGCAAAAATTACATACATTAGATTTAGCTGAT
AACTTAATCGAAGAATCTAACCGACTATGGACTTTGGGAGTTTGCAATGCTTTACGTAAA
CTAACACTGAGAGGATCTCCTATAGCTGATATTATAAATTACCGTTCTGTCGTCGCGTCC
GCTTTACCAATGCTGAATGTTCTGGATGATAGCCCACTAAATGCTTATGAAGATGAATAT
ATCCCCGAAGAAGGCAGCGATAGCTCAGAGAGTGATGTTGATGCTGAGGCGGCGGCAAAT
CAGACACTTTCAGATGAAAAAGAACATCAAATGTCACAAGCTGGACCATCGACGGATACA
ATTCAGGATGAGGTGATAAGGTCCCAAGTGCCGACAAGACGGCGTCCTGCTACAACAGAG
TGTGGTGGTCAACGACCGCAGCGACCAGAAATTAAACGACGACCCCGGACCGCACTCGAA
AGGACCATCGACAGTTGCACCCGTCTGCAGATTATGAATACTCTGATGGACGACGAGTGG
TGTAGCGCTGGTAGTAAGTTGACATCTTATAACGCTGTTGGCGGGAACATCGCTAGAGCA
GTACGAGGAGCAGCCAGGAATAAACTACGAGATTCCGTGGAGGCCGAACTACAACTGGTA
TCACAGAGTATGGAGGCGGACAGTCGGGCTCTGGCTGCGGAAATACCACGAGCACCAGAA
CCCACTCAATGGGACAGGTTCAGGCTTGAGACGGGTATTGAAATAGACATAGATTTCAAC
AAGAGACCGAAGGATGTCGATCCATCGAAAGTTTTAGATAGGATCGAGAGGATTGAAAAG
GAAACTATGGAGCGACTCGGGAGACCAGGTCAAGCAGATGTAGCTGGGTATAGTCCATTA
ATGTCGGATACTTCTAGAATATTTACAGGTATCAGAGACGATGATCTGTGGAAGCAAATT
GAAGACTTGAAGGTGTCTTCAGACCCGCCCACCAACATCGACGAACTGTTTAAAAATATT
ATACCGTAA
Protein sequence:
MPFLEAPSVDLGSAPRTPSVVISPTPSEVSSASSPEPQNVRATPLFRALAMRPPEPEQPP
GQDELERRLPGYRRIVIPRELTLIELLKQCSGVNTDEEVLSIREAKLRVVAERVGLRRLH
VLVPHLKSLILDGSALTSLRDLGIGLVHLKKLSVSRCGLTSLDGVWGLNSLRELHASGNR
LKDFHQLAALQKLHTLDLADNLIEESNRLWTLGVCNALRKLTLRGSPIADIINYRSVVAS
ALPMLNVLDDSPLNAYEDEYIPEEGSDSSESDVDAEAAANQTLSDEKEHQMSQAGPSTDT
IQDEVIRSQVPTRRRPATTECGGQRPQRPEIKRRPRTALERTIDSCTRLQIMNTLMDDEW
CSAGSKLTSYNAVGGNIARAVRGAARNKLRDSVEAELQLVSQSMEADSRALAAEIPRAPE
PTQWDRFRLETGIEIDIDFNKRPKDVDPSKVLDRIERIEKETMERLGRPGQADVAGYSPL
MSDTSRIFTGIRDDDLWKQIEDLKVSSDPPTNIDELFKNIIP