| New model in OGS2.0 | DPOGS200812 |
|---|---|
| Genomic Position | scaffold966:- 9503-14993 |
| See gene structure | |
| CDS Length | 1230 |
| Paired RNAseq reads | 410 |
| Single RNAseq reads | 1165 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005386 (8e-78) |
| Best Drosophila hit | centaurin beta 1A, isoform A (5e-99) |
| Best Human hit | arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 (6e-80) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC012753 [Tribolium castaneum] (1e-139) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC012753 [Tribolium castaneum] (2e-129) |
| GeneOntology terms | GO:0008060 ARF GTPase activator activity GO:0032312 regulation of ARF GTPase activity GO:0008270 zinc ion binding GO:0006911 phagocytosis, engulfment |
| InterPro families | IPR001849 Pleckstrin homology domain IPR011993 Pleckstrin homology-type IPR004148 BAR |
| Orthology group | MCL10944 |
Nucleotide sequence:
ATGAAGCCTCTAATAGATTTTGATGAATGTCTCAGAGATTCACCCAAATTTAGGGAACAG
CTGGAAACCGAAGAGGCTAACATTGAGGGTTTGGAACAAAAGCTTGATAAAGTTCTCAAG
ACTTGTTCTGTTATGATTGAATCGGGCAAAACATATATGAATCATAGAAGCACATTCACA
AATGCTCTGTGGGATCTGAGCAGTAGCTTTTCAGAAGATTCAACTGTGGTGTCAGCATTG
CATAGAATGATACATGCTTTGCAAGAAATGACCAAGTTCCATTCAATACTGTTGGATCAA
GCCTCAAGAACAATACTTAAGAACCTTACAGCTTTTATTAAAGTTGACATTAAAGGTGTG
AAAGAAAGCAAACATCATTTTGATAAAATCTCAAATGAATTGGATATAGTATTAAATAGA
AATTCGCAGGTATCTCGTCATAAGTCCACTGATGTGGAAGAAGTCATGAATCTCTTACTT
GCCACTCGATCATGTTTCCGGCACACAGCACTCGATCATGTCCAGAAGATTACGATGCTT
CAAGTGAGGAAACGTCATGAGATATTGGCTACGTTCCTATCGTATTTGCAAGCCTGTAGC
ACATACAATCACCAGGGCGCCGATCTGTCCGAAGATTTGGAACCATTTCTTAAATCCACC
GCTGACGAGATTGCAACAATGCGTAACGATACTAAGTCGCTGGACAAAGAGATGGAAAAT
CGTCATACTATAGTTAATAGCAAGGATACAGTGCTACCAAGTTGTATCATGAGCAGTGAC
GGTGAGAAGGAAGGTACGATCAGCCCGTGTCTGAAGAACATGCCCAGGATGCAGGGGTAT
CTGTTCAAGCGAACGTCCAACGCCTTCAAGACCTGGAACAGAAGATGGTTCTATTTATAC
GATAACCGACTCGTCTACAGGAAAAGAACCGGTGAATTGAACGTTACTGTTATGGAAGAG
GATTTGCGACTGTGTACCGTCAAACCTGTGTATGACGGGGAGAGGAGGTTCTGTTTTGAA
GTACTATCACCATCAAAGAGTCACATGCTTCAGGCGGATTCGGAGGAAATGTTGAACTCG
TGGATAGCAGCTCTACAGAACGGTATACGGTCCGCCATACAGCAGGGACAGAGCAGGGAC
AACCCGGACTCGCAGATGGTGTTGGTACCCGACGACACCAAACAGACCAGCAAACATAAC
TTGACACCTGCTATGAAGAAAATAAGGTAA
Protein sequence:
MKPLIDFDECLRDSPKFREQLETEEANIEGLEQKLDKVLKTCSVMIESGKTYMNHRSTFT
NALWDLSSSFSEDSTVVSALHRMIHALQEMTKFHSILLDQASRTILKNLTAFIKVDIKGV
KESKHHFDKISNELDIVLNRNSQVSRHKSTDVEEVMNLLLATRSCFRHTALDHVQKITML
QVRKRHEILATFLSYLQACSTYNHQGADLSEDLEPFLKSTADEIATMRNDTKSLDKEMEN
RHTIVNSKDTVLPSCIMSSDGEKEGTISPCLKNMPRMQGYLFKRTSNAFKTWNRRWFYLY
DNRLVYRKRTGELNVTVMEEDLRLCTVKPVYDGERRFCFEVLSPSKSHMLQADSEEMLNS
WIAALQNGIRSAIQQGQSRDNPDSQMVLVPDDTKQTSKHNLTPAMKKIR