| New model in OGS2.0 | DPOGS200177 |
|---|---|
| Genomic Position | scaffold177:- 34214-54646 |
| See gene structure | |
| CDS Length | 2433 |
| Paired RNAseq reads | 3681 |
| Single RNAseq reads | 11684 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002926 (3e-179) |
| Best Drosophila hit | ND |
| Best Human hit | rho GTPase-activating protein 21 (4e-09) |
| Best NR hit (blastp) | conserved hypothetical protein [Culex quinquefasciatus] (3e-46) |
| Best NR hit (blastx) | conserved hypothetical protein [Pediculus humanus corporis] (5e-36) |
| GeneOntology terms | GO:0031410 cytoplasmic vesicle GO:0008150 biological_process GO:0005096 GTPase activator activity GO:0007165 signal transduction GO:0005515 protein binding GO:0003674 molecular_function GO:0005622 intracellular GO:0005575 cellular_component GO:0005737 cytoplasm GO:0005856 cytoskeleton GO:0005794 Golgi apparatus GO:0016020 membrane GO:0030054 cell junction |
| InterPro families | IPR001478 PDZ/DHR/GLGF |
| Orthology group | MCL24034 |
Nucleotide sequence:
ATGGCTAATGTATTGAATGTCGCAATTGTATGTCAAGTACTCCAATACTATTGCGAGTAC
TGCGTGTACGACTCGCCTCCGTCGATCGTCCAGGCTCCAGCTGTTCTCTCCCCGCCGGTG
TTCCCTTCACCCCCCGCTCCCCCTGGAACCCTCGCGCCCTCAGCTCCCATCTCATCCACT
TCTCTGTCAACAAATTGCTCCGCCCCAAGGACCATCGTCATCCAGCGACCCGACGCCAGG
CACGGCTTCGGTTTCACCCTCAGACATCTCGTTGTTTACCCACCAGAGTCGTTAAACGAG
CTATATGAGGATGCGCGCCACCTCGCTGTGGGCGCGGTGGGCGCTCCGATGGACACAATC
TTCGTAAGGTCTGTGCGTGCGGGCGGGCCGGCGGCGGCCGCGGGGCTGCGAGCCGGCGAC
CGTGTGCTGGCCGTCAACGGAGAGCCGGTAGCCTGCGGCCGTTCGCGAGCGCCCTACGCC
AGGGTTGTGCAACTAGCGCAGAGGGAACCCAGGGTGTTGAGGCTCACCGTCGTGCCGAGG
GATCACGATCTCTTACAGAGGTATTTCAGCGAAGCAGCGTACAATCCGGAGACTAACCAG
CGACACAGCGAAATGCCGGCGGTGACGGAGCACGAGTCGCGCCTGTTCGACGCCTACCGC
CGACCAACCACAGGAAGACACGACCGTCCGACCGCTGTCCGACACGACCGTCCTAGTGAG
CCGGAGTACGCGACGGTGGCGCCACCACCCAGGATCGACGCTCCCCGACTATCAGCAACG
CATTACATTATGCATGATGGCAGGAGAGAATCCGATACTTCTTTGCCATCATCAGCTACA
GAAAGTAAAGACAGTCTCGGCTCATTTGACTCCAACTCGACACTGACGGGCCGAGAACTG
GACGATTCGATTATCCTCTCCCGAATACGAAAGAGTCTGGAACAGAAGGAGGCGTTTCTG
AGACGTCCCAGCCAACCCACGGGATGGCTCACTCCAGATGCCCCACCGCCGATTAAACAA
AAGGAATTCTACGCGAGGCCACAGAAATTGCAAAAGCAATCGTGGCCACCGCCGCCTTCT
TCACCACCACTGGCCGCTTCTCCGCCGCTATCTCTGCTTCAACCGACAAACCAGGAACTC
AAAGCAGACGAGTGTGCGACCAGTGTTGATAGCGGAACGTACAGTGGATATGGCGAGTTG
AACGGTACTCACAACGACAAAAACAGGTTGAAGCAAGACAAGACCCAGTTCGTGGCAACT
TTGTCCAAAATACAGGAAACATCGCCGAATATACACAATAGCACGAATATGGGACCGCTC
AGCAACGGCTCGTCGGCTGAATTCAGGGATGAGAATATGGCTTCTAATAATCAGGACAAC
AGGTACCCAGTACCCGAGCTCCAACTCGTCACAGCTCGTACCCGTCAGTTGGAAGAAGCG
CGTGTGGGTGAAAGGAGAACCGAAGTTGCTAGAAGTGAATTAGCGCGGCTGACGACAACC
CGGCTAGAACCGAGCGTGGCGCTACGGAGGAAGGAGTTCGAAGCAAGAGCGGCCAGGAGA
GAGGCGCGGTCGCTGGATGTGCAACCACAGCAAGACTTAGAGGAAGAATCGACACCCCTT
GGCGGCAGCTTATCGGGCAACCAGCTAATGATTACTGGCAGCAAGCACCTCCACTGTACG
CCTCCAGCAGGATTCGCTCCCGAAATAGAAAAGGTTCAAATGCGAACAAGGTCAAATAGT
ACCGGTAGTGAAGGATTACCCATTAGAAGACATCATGCCACAGATGGCAGTCACGCGAAG
AGACGCATGGGGCTGAACAGGGAACAGATGGAAGCGATGAACCGCGTGTCGCTGCCGGGC
GGCGCAGCGCGGCCAACTCGGCTCAGCCTGGCGCCGCCCTCGCCTACGCCGCCCACTTCC
TCGGGCTCGGCGCACACGTCCGGCTCGCCAACGCCCACCACGCCCGCTGACTCAGGTTTT
GCTGACGACTTGGTTACGAGAAGACACAAAAAGGATGCGCAAATGGGAGAAGAAGAACGT
GCTATGAGAAGGGTGTCCTACCTTAAAGCAACGTGGGGAGACAGACTACACTTGGACAGC
GATGTGGAACCAGAGGCTGAACAAAACGCTCTCAGGAGTGCTTACCGCAAATGGCGGCCA
CCACGATTCACAGAGGACATAACGCCGTTGCTACGGATATTCGACCCTCAAGCGTCGATT
CCAACGCGTCCGGAGAAGAAGTCCCAAGAGAGCACAGAGAACTCCGAGGACGTGGAAGCT
GACGTACAAGGGAACGTTCAGATAAAGATGGTGGTCAGCAATGGAAAGCGAGCCAGCGAT
CGCTCGTGGAAGCAAGTCTGGGCGATGCTGCAAGGCACCAAGCTGTATCTTTACAGACAT
CACCCCACACAGGTCAGTCTAGACTTATTATAA
Protein sequence:
MANVLNVAIVCQVLQYYCEYCVYDSPPSIVQAPAVLSPPVFPSPPAPPGTLAPSAPISST
SLSTNCSAPRTIVIQRPDARHGFGFTLRHLVVYPPESLNELYEDARHLAVGAVGAPMDTI
FVRSVRAGGPAAAAGLRAGDRVLAVNGEPVACGRSRAPYARVVQLAQREPRVLRLTVVPR
DHDLLQRYFSEAAYNPETNQRHSEMPAVTEHESRLFDAYRRPTTGRHDRPTAVRHDRPSE
PEYATVAPPPRIDAPRLSATHYIMHDGRRESDTSLPSSATESKDSLGSFDSNSTLTGREL
DDSIILSRIRKSLEQKEAFLRRPSQPTGWLTPDAPPPIKQKEFYARPQKLQKQSWPPPPS
SPPLAASPPLSLLQPTNQELKADECATSVDSGTYSGYGELNGTHNDKNRLKQDKTQFVAT
LSKIQETSPNIHNSTNMGPLSNGSSAEFRDENMASNNQDNRYPVPELQLVTARTRQLEEA
RVGERRTEVARSELARLTTTRLEPSVALRRKEFEARAARREARSLDVQPQQDLEEESTPL
GGSLSGNQLMITGSKHLHCTPPAGFAPEIEKVQMRTRSNSTGSEGLPIRRHHATDGSHAK
RRMGLNREQMEAMNRVSLPGGAARPTRLSLAPPSPTPPTSSGSAHTSGSPTPTTPADSGF
ADDLVTRRHKKDAQMGEEERAMRRVSYLKATWGDRLHLDSDVEPEAEQNALRSAYRKWRP
PRFTEDITPLLRIFDPQASIPTRPEKKSQESTENSEDVEADVQGNVQIKMVVSNGKRASD
RSWKQVWAMLQGTKLYLYRHHPTQVSLDLL