| New model in OGS2.0 | DPOGS200504 |
|---|---|
| Genomic Position | scaffold10084:+ 1404-6104 |
| See gene structure | |
| CDS Length | 1065 |
| Paired RNAseq reads | 690 |
| Single RNAseq reads | 3397 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001726 (1e-124) |
| Best Drosophila hit | iron regulatory protein 1B (3e-109) |
| Best Human hit | cytoplasmic aconitate hydratase (8e-101) |
| Best NR hit (blastp) | iron regulatory protein 1 [Manduca sexta] (8e-132) |
| Best NR hit (blastx) | GF20674 [Drosophila ananassae] (2e-140) |
| GeneOntology terms | GO:0003729 mRNA binding GO:0005506 iron ion binding GO:0003994 aconitate hydratase activity GO:0006447 regulation of translational initiation by iron GO:0051539 4 iron, 4 sulfur cluster binding GO:0030350 iron-responsive element binding |
| InterPro families | IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha IPR018136 Aconitase family, 4Fe-4S cluster binding site IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 IPR015934 Aconitase/Iron regulatory protein 2/2-methylisocitrate dehydratase IPR015937 Aconitase/isopropylmalate dehydratase |
| Orthology group | MCL39578 |
Nucleotide sequence:
ATGTTGGGTGCCGGTTTGCTAGCAAAGAAGGCTGTGGAGAACGGTTTGTCCGTCCTTCCA
TACATCAAGACCTCGTTGTCGCCAGGGTCTGGTGTAGTCACGTATTATCTGAAGGAATCC
GGCGTGGTTCCGTATCTGGAAAAGTTGGGTTTCGACATCGTGGGTTACGGCTGCATGACG
TGCATCGGGAACTCGGGACCCATAGACGACAACATCGCCAACACCATAGAGAAGGTCTAT
GAGAAGATAGAGCAAGGTTCATCATCCTGGCAGGCGCTGCAGGTCCCTCAGGGGAAGCTC
TACAACTGGGATGACAGCTCTACGTACATCAAGAGACCGCCTTTCTTCGATGCCATGACT
AGAGAGCTGCCTGCCATCCAGAGTGTATCGGGGGCGCGGTGCCTCCTACTGCTGGGCGAC
TCGGTCACCACGGACCACATCTCGCCAGCGGGATCGATAGCCAGGAACTCTCCCGCCGCC
AGATATCTGGCTGAGAGGGGCCTGACCCCGCGCGAGTTCAACTCGTACGGGTCCCGGCGC
GGTAACGACGCGGTCATGTCCCGGGGCACGTTCGCCAACATCCGTCTGGTGAACAAGCTC
GCGGCGCCCGGACCGCGCACCAGGCACGTGCCCTCCGGAGACGTCATGGATGTCTTCGAC
GCTGCTCAGAGATACGCCGAGGAGAAGGTCCCGCTGATAGCGATCGTCGGTAAGGACTAC
GGCTCAGGATCCAGTCGGGACTGGGCCGCTAAAGGACCCTACTTGTTGGGCATCCGAGCT
GTGATAGCAGAGTCCTTTGAGAGAATCCATCGCTCCAACCTGGTGGGTATGGGGATAGTT
CCCTTGGAGTTCACTAACGGAGAAAACGCAGAGAGCTTGGGTTTGGACGGTACCGAGTCC
TATGATATAGATGTCCCTCATGATGTGAAGACGGGACAGATGTTGACTGTTAAGGTGGAC
AGCGGCAAATCATTCCAAGTGAAGGTCAGGTTTGATACCGAGGTTGATCTGACATATTTC
AGGAACGGAGGCATCCTGAACTACATGATCAGGAAGATGCTGTGA
Protein sequence:
MLGAGLLAKKAVENGLSVLPYIKTSLSPGSGVVTYYLKESGVVPYLEKLGFDIVGYGCMT
CIGNSGPIDDNIANTIEKVYEKIEQGSSSWQALQVPQGKLYNWDDSSTYIKRPPFFDAMT
RELPAIQSVSGARCLLLLGDSVTTDHISPAGSIARNSPAARYLAERGLTPREFNSYGSRR
GNDAVMSRGTFANIRLVNKLAAPGPRTRHVPSGDVMDVFDAAQRYAEEKVPLIAIVGKDY
GSGSSRDWAAKGPYLLGIRAVIAESFERIHRSNLVGMGIVPLEFTNGENAESLGLDGTES
YDIDVPHDVKTGQMLTVKVDSGKSFQVKVRFDTEVDLTYFRNGGILNYMIRKML