New model in OGS2.0 | DPOGS216051  |
---|---|
Genomic Position | scaffold4866:- 12194-20855 |
See gene structure | |
CDS Length | 1017 |
Paired RNAseq reads   | 27 |
Single RNAseq reads   | 77 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011189 (8e-23) |
Best Drosophila hit   | Syt7, isoform E (1e-21) |
Best Human hit | synaptotagmin-15 isoform a (6e-44) |
Best NR hit (blastp)   | PREDICTED: similar to synaptotagmin XV-a [Strongylocentrotus purpuratus] (1e-58) |
Best NR hit (blastx)   | PREDICTED: similar to synaptotagmin XV-a [Strongylocentrotus purpuratus] (9e-58) |
GeneOntology terms   | GO:0000299 integral to membrane of membrane fraction |
InterPro families    | IPR000008 C2 calcium-dependent membrane targeting IPR018029 C2 membrane targeting protein IPR008973 C2 calcium/lipid-binding domain, CaLB |
Orthology group | MCL20494 |
Nucleotide sequence:
ATGCCGGCAGAATGCGCTCACGGTGTCTTGAGGTCCTGCGGTGTGGTTTCGGACATGGGA
TTTTATATTTTTAAGAACGGGGTCCCAGCAAACACTACTGATCTTGGAGTATTGGATCCA
TCTCTCTACAAAGCTGACTGTTTGGTAGAAGATCAACTTTGGCCCGAGGGACATGTGGGA
CGGGTGTGGTTTACCTTGAAATATGAATCCGGCACTGAAAGGCTCCAAGTGCACATTATT
AAGGCGAAGCATCTACCTTCACGTACACCAGCTCTTGCAAACGCATGTGACCCCTATATC
AGAATTCAACTTATGCCGGACGAACGAAGAGTTTTGCAGACGAAACAGAAGAAGAAGACC
TGCAACCCATTCTTCGACGAGACATTCGTATACCAAATTCCTCCTGGTAAATTAGAAACG
CTTACCTTGAAGCTTTCCGTTCTGGACATTGGAAGAGTTGGTAAAAACAAACAACTGATT
GGCCATATCATTCTACCATTGAGTGAACTCGAAGGAGTGGCTCCGGACGAGGAACCACAA
CTTTATAAATTAGACGTTGAGAAGGAAGTACAAGATCCAACATCGGACTTGGGAGAAGTT
CAAGTATCTTTACTGTACAATGAAAACTTGAACCGGCTCACTGTCACTGTAATAGAAGCA
CGAAGTCTAAAGCTGGATCCATCATCAAGTAGACGGGAGGTGATAGCTAGAGTGACTCAA
GAACGAGCATGTCGGGGAGTAAGAGCTCGTAGAACGGCTGCTGTTGAAGTATCTGAAGAA
GGAAATGCTTTGATCTCCGAATGTTTTCACTTTAGACTACGAGCTGATGAGTTGCACACA
ACCAGTGTTACAGTGCAGGCCCTACAACCTCACTCCGTGTATGCCAAAGATCGTCTACTC
GGTAAGTTTGTGCTTGGATCATACATGTTCACTAGAGGAAGAGCTCTGCAACATTGGAAC
TCGGCGATATCTAGCCCAATGGAACAAGTGAAACAATGGCACCCGCTCACAAACTAA
Protein sequence:
MPAECAHGVLRSCGVVSDMGFYIFKNGVPANTTDLGVLDPSLYKADCLVEDQLWPEGHVG
RVWFTLKYESGTERLQVHIIKAKHLPSRTPALANACDPYIRIQLMPDERRVLQTKQKKKT
CNPFFDETFVYQIPPGKLETLTLKLSVLDIGRVGKNKQLIGHIILPLSELEGVAPDEEPQ
LYKLDVEKEVQDPTSDLGEVQVSLLYNENLNRLTVTVIEARSLKLDPSSSRREVIARVTQ
ERACRGVRARRTAAVEVSEEGNALISECFHFRLRADELHTTSVTVQALQPHSVYAKDRLL
GKFVLGSYMFTRGRALQHWNSAISSPMEQVKQWHPLTN