Genomic Position | scaffold549:+ 49025-51871 |
---|---|
See gene structure | |
CDS Length | 432 |
Paired RNAseq reads   | 4 |
Single RNAseq reads   | 30 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008990 (2e-09) |
Best Drosophila hit   | CG33557 (9e-13) |
Best Human hit | basic helix-loop-helix transcription factor scleraxis (2e-15) |
Best NR hit (blastp)   | PREDICTED: similar to Par1 protein [Nasonia vitripennis] (2e-18) |
Best NR hit (blastx)   | PREDICTED: similar to Scleraxis [Tribolium castaneum] (3e-18) |
GeneOntology terms    | GO:0045449 regulation of transcription GO:0030528 transcription regulator activity GO:0005634 nucleus |
InterPro families    | IPR001092 Helix-loop-helix DNA-binding domain IPR011598 Helix-loop-helix DNA-binding |
Orthology group | MCL12445 |
Nucleotide sequence:
ATGGACACGTATACAAGCTATCAAATGAATGAAGAAACTTGGGAGCAGCTTCGTTCAGTG
ACACAAGCTCCAAATGCGCCTGCGCAAAAACAAAGATGTCAGGCGAATGCGCGGGAAAGA
GATAGGACCCAGAATGTAAACATGGCGTTCAATACTCTCCGACATCTCATACCAACGGAA
CCAGCAGATCGCAAACTTAGCAAAATAGAGATCCTCAGGCTAGCTGGCAGTTATATCACA
CACCTCGACAATCAACTGTATACCGACTTTAACCAGCGAGGTTTTCACAGGGGATATGGA
ACAGCCGTGTTTGAAAAAATCCGACACCGTATACAAAACATCTTTGTGTACGTTCTGTTG
GTCAACATTAAAAAAGAAAAAATAACTTCAAACAACAAAGATTTTTGTTGTTATCATAAA
GTGAAGAAATGA
Protein sequence:
MDTYTSYQMNEETWEQLRSVTQAPNAPAQKQRCQANARERDRTQNVNMAFNTLRHLIPTE
PADRKLSKIEILRLAGSYITHLDNQLYTDFNQRGFHRGYGTAVFEKIRHRIQNIFVYVLL
VNIKKEKITSNNKDFCCYHKVKK