| Genomic Position | scaffold6667:+ 1403-4800 |
|---|---|
| See gene structure | |
| CDS Length | 2691 |
| Paired RNAseq reads | 23 |
| Single RNAseq reads | 81 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002097 (1e-09) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | Gag protein [Bombyx mori] (2e-68) |
| Best NR hit (blastx) | Gag protein [Bombyx mori] (1e-43) |
| GeneOntology terms | ND |
| InterPro families | IPR001878 Zinc finger, CCHC-type IPR013084 Zinc finger, CCHC retroviral-type |
| Orthology group | MCL10285 |
Nucleotide sequence:
ATGGGTGATAAAGAGTATGATGGTGGGGGTGCCCGGGGGGGAATACCGGGTGTTTCGAGT
GTAGGGAATGTGGCGGCGGATGATTCGCTGTCTTCGCGTCCGGGATCGGAGTTAGGAGCC
AAGCGACTCTTTTCGGAGATGTCTGGCTCCGATACCGAGACCGGGGGCGGGATAGTTAGA
GGGCTGGATCTGGCGGGAAGGCGAGGGCGGGGTAAAAATCTGGCTAGAGCCAGGAAATTC
TTGCGCCAGCGGGAAGAGGAGGAGTCGGAGGCTGCCTTCGAGTCCTGTATGGAAAGGAGT
CTTGCGAGAGAGAGGGACGGTGCGAAGATGAGGGCGAAGGGGAAGGAGGTCCCGCTTGAG
CTGGAGGCCATGGGGGCGGAAATGATAATGGTCGAGGCTGAGAAAAGCCTCGACCTTATC
AAAAGTTTGGTAGGAAAAAGTACCAATTTGAAGGGAGGGTACGCCTCAAAAATAACGAAG
GCTTCTGTCTTCCTGAAGGAGGTCCTCGACGTGCTGGTGACGCGCACGGAAGCGGAAGAG
ACCCGCCGTCTTAGAGCCGACATCGGTAGGCTCCAAAGAGAAAACGCGGGTCTGAAGGAG
GAAGTGCGCGCTCACCGGCAGCAGTTTGAGGAGATGCGACGGGAGAGGGTGACGGCGGCT
CAGGCGGCTTCAGACGGCCAAACCAGCCGGGACCAGTTCCAGGTGCTGGAGGCCAACATC
GCCAGGATGGTGGGTAACCTGGTGGATGGAAGGCTTGCAGCACTGGAGTCCCGGCTGAAA
CGGGAAGAGGTCTCACGCCCCCCCCTGGCGGGCGACAACTCGGCCGTCGCCGTAGCTGCC
AGAGCGGCGATCCGCCGTGCGGGGATGCAAAGGGGGGCCGGTAAGGCGGCTCCTTCACCG
GCGTCTTCGGCGCCGGTGCTGGTGGTGTCGGAGGACGAATTTCCCTCCCTCCCTCCACCA
CCCTCCAAGGGAAAGGGTAGGGGCAAGGACCCCAAGAGAGGAAAAGAGGTGGCCTGGACC
GCGTTTGGCCCAGCCATCTCTAGTGGAAGCGTCGAACATGCTGCAGCTGGGGCCGGGGCT
GTTGCGGCGGGGTGGACGGAGGTGGTCCGCCGCAAGGCCCCCAAAAAGAAGGAAGTTGTG
CCGGTAACCAAAACACCGGCGCCACAGCCAAAAAAGAAGGCGGGCCCTAAGGAGGGCCCC
AAGAAAGTGGCGCTCCCACGCTCACAGGCCGTAATGTTGAAGTTACGGCCTGAAGCAGCG
GCTAAGGGGGCGACCTACTTGTCGGTCCTCTTAAGGGCCGAGAGGGAGGTAAATACGAAG
GAGCTGGGTATCGGGCCCCTGAAAATCCGTTCATCGGCAACAGGGGCCCGCATCATCGAG
GTGCCCGGCTCAGCCAGCGCGGACAAAGCCGACGCTTTGGCCGCTAAGCTGAAGTCTGTG
CTGGCGGAGGAGGCGGAGGTGTCGAGGCCCGTGAAATTCACGGACGTAAGAGTAACGGGC
CTCAACGACGCGACGACCGCGGACCGGCTGATAGCCGCGGTCGCGCAGGAGGGGGGCTGC
ACCGAGGCCCAGGTCAGGGTTCGTAGCGTGCGACCTGGGCCTCGCGGCACAGGCTCCGCC
CTGGTGGAGGTGCCGGCTGCGGCGGCTAAAAAGCTGCTGCAGCTGGGCAGCCTGTCAGTC
GGGTGGAGCCAGGTGCGGCTCTCGCACATGGAGGCACGACCCAAGCACTGCTTCAAGTGC
TTGGGAACGGGGCACGTTGCGGCCGCGTGCCCCAGCCCAAAAGACCGCAGCGGTTTGTGC
TACCGCTGCGGCAAGGAGGGCCACAAGTCCGCCCAGTGCTATGCGTCACCGCGCTGCGCT
GTGTGCGCTGACGCGAGCAAGCCGGCGGACCATGTGATGGGGGGGCATTCGTGCTGCCCC
CCATCCACCCGTGGGAAACTCCCGGCCCAACCACAAAGGGCGGGGGCCAACGGGAACCAC
TGCGCCGGGGCTCAGGACCTCTTCCTGCAGTCCATGGTGGAGTGGGCCGTTGACGTGGCG
GTCATAGCGGAGCCGTACTATGTCCCTGCCCTACCTCATTGGGCGGGAGACACGGGCGGC
TCCGTGGCGATCGTCACGCGGCCGGGCGCCGTGCCCCCTCGCAGTCAAGGCGAGGGGCCA
GTGTTTTCTCGACACTCTCGGGCCGGTGGTAGGGCAGTTAGCGCCTCTCCAGGTGGTTGT
GATGGGGGACCTCAACGCCAAGTCCACGGCGTGGGGAAACCCCCTCACAACACCCAGAGG
AAGGGAGCTGGAGGAATGGGCGCTAACTGCTGGGCTGTCCCTACTCAACACGGGCTGAGG
AGAACTGATGACAAAACATATTATCCTGGTACAGATGATGATGATCTTGATAATAACTTT
CAAAGAAACATCACACCGAGGTCACATCAGAGACAAAAAATGCAAGGTAATAATTACATG
TGTGTTACGCAGGTTTCACATCCGCCGACTGCTGAAGAAGCTTTATCAGTTCCACATGCT
AGACAATGTAAACAGGTAATGGATGAGGAGTACAAATCTCTGTTGGACAATAACACATGG
GAAGTTACTACTCTGCCAGGTGATAAACATTCCATACCATGCAAATGGCTTTTCAAAACA
AAGACAAACGAAAGTGGAGACAAAAGGTTGTTCTCAGAAACCAGGAATTGA
Protein sequence:
MGDKEYDGGGARGGIPGVSSVGNVAADDSLSSRPGSELGAKRLFSEMSGSDTETGGGIVR
GLDLAGRRGRGKNLARARKFLRQREEEESEAAFESCMERSLARERDGAKMRAKGKEVPLE
LEAMGAEMIMVEAEKSLDLIKSLVGKSTNLKGGYASKITKASVFLKEVLDVLVTRTEAEE
TRRLRADIGRLQRENAGLKEEVRAHRQQFEEMRRERVTAAQAASDGQTSRDQFQVLEANI
ARMVGNLVDGRLAALESRLKREEVSRPPLAGDNSAVAVAARAAIRRAGMQRGAGKAAPSP
ASSAPVLVVSEDEFPSLPPPPSKGKGRGKDPKRGKEVAWTAFGPAISSGSVEHAAAGAGA
VAAGWTEVVRRKAPKKKEVVPVTKTPAPQPKKKAGPKEGPKKVALPRSQAVMLKLRPEAA
AKGATYLSVLLRAEREVNTKELGIGPLKIRSSATGARIIEVPGSASADKADALAAKLKSV
LAEEAEVSRPVKFTDVRVTGLNDATTADRLIAAVAQEGGCTEAQVRVRSVRPGPRGTGSA
LVEVPAAAAKKLLQLGSLSVGWSQVRLSHMEARPKHCFKCLGTGHVAAACPSPKDRSGLC
YRCGKEGHKSAQCYASPRCAVCADASKPADHVMGGHSCCPPSTRGKLPAQPQRAGANGNH
CAGAQDLFLQSMVEWAVDVAVIAEPYYVPALPHWAGDTGGSVAIVTRPGAVPPRSQGEGP
VFSRHSRAGGRAVSASPGGCDGGPQRQVHGVGKPPHNTQRKGAGGMGANCWAVPTQHGLR
RTDDKTYYPGTDDDDLDNNFQRNITPRSHQRQKMQGNNYMCVTQVSHPPTAEEALSVPHA
RQCKQVMDEEYKSLLDNNTWEVTTLPGDKHSIPCKWLFKTKTNESGDKRLFSETRN