New model in OGS2.0 | DPOGS213012  |
---|---|
Genomic Position | scaffold571:- 36105-38203 |
See gene structure | |
CDS Length | 1170 |
Paired RNAseq reads   | 301 |
Single RNAseq reads   | 739 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA006933 (5e-76) |
Best Drosophila hit   | CG14100 (4e-35) |
Best Human hit | RNA methyltransferase-like protein 1 (1e-44) |
Best NR hit (blastp)   | PREDICTED: similar to RNA methyltransferase like 1 [Tribolium castaneum] (3e-82) |
Best NR hit (blastx)   | PREDICTED: similar to RNA methyltransferase like 1 [Tribolium castaneum] (4e-71) |
GeneOntology terms    | GO:0005515 protein binding GO:0008173 RNA methyltransferase activity GO:0005739 mitochondrion GO:0003723 RNA binding GO:0016740 transferase activity GO:0006396 RNA processing |
InterPro families    | IPR001537 tRNA/rRNA methyltransferase, SpoU IPR013123 RNA 2-O ribose methyltransferase, substrate binding |
Orthology group | MCL15264 |
Nucleotide sequence:
ATGCATCGAAAACCGGCCAAAGTTTTATTACCTTTTGAACCAAATTCCAATTCCAATTTG
AAAAAAGAAAAGGTAATTGATTTAGGGAACAGCGACACAAGGAAAGAAAAAAATATTCAT
GATGATAAAGAAATAAATGTTAAAAACGCTCCAGTTGTTAGTAAAGCCAAATTCAAAGAA
ATTAAGGAAAAGAAAGAGACTGTGTTAAAAAAAAGAAAATTCTATTTAAGCCAGAAAAAA
GTATTTGATGACAATGGTGAAATTATTTATGAAAAATTAAATAATAATGATGGTAGAATC
AGCTCCCTCCTTGTTAGGCTAAAGTCCAAGAAAGAGAGATTACGAAGCCAACAAATAATG
GTGGAGGGTTGGCGGTTGATAGTAGATGGACTGGAAGCAAAATGTGCTTTAAGATATGTT
ATATTCAGCCAATTAGAGGATTTAAACAAATTGAGACCGTTCCTGCCTGATACTGGTGTA
AAGTTTTATAAGATACCATACAAAGAAATCGAATTATGGTCCAATGTTGACACACCCCCT
GGAATTATTGGTGTGTTTGATACGCCTACAACAGATAATGTAAAGTGGTTAAGTAAACCT
TTGCCAATACATTTAATATGTGACAATGTACGAACACCTGGCAATCTTGGAGGCATACTA
AGGGCAGCGGCTGGTGTGGGATGCGAGAAAGTTTTATTAACCAAAGGTTGTGTAGATCTC
TGGGATCCAAAAGTGGTAAGGAGTGGTGCTGGTGCACACTTCAGACAGCCTATCATATCG
TCAATAGAGTGGGAAGAGCTACCTAATAACTTAGCAGAAAAAACAACAATATTTATAGCA
GACAGCAATGTAAAATTGATGAATGACGATTTTGAATCGGAAAATGCTTTGGACTGTAAT
ATACCCGTTGTACCTTATTATAGTGTTGATTTTGGTATCTTGAAACATATCACACTGATA
ATTGGAGGAGAAACGGAAGGTATAAGTGAAAACAGTTACAGGTTGGCAGCTAACAGAAAT
GGTCTTAGATTAAATATTCCGCTACAAAAAGGAGTTGATAGTCTGAACACTGGAATGGCA
ACTGCTGTAATAGCATTTGAAATGAGAAAACAATTAATACAGGCCCAGGCAAAGGCTCAG
TTAGATAAGATAGGAATGAAAGTAGTTTAA
Protein sequence:
MHRKPAKVLLPFEPNSNSNLKKEKVIDLGNSDTRKEKNIHDDKEINVKNAPVVSKAKFKE
IKEKKETVLKKRKFYLSQKKVFDDNGEIIYEKLNNNDGRISSLLVRLKSKKERLRSQQIM
VEGWRLIVDGLEAKCALRYVIFSQLEDLNKLRPFLPDTGVKFYKIPYKEIELWSNVDTPP
GIIGVFDTPTTDNVKWLSKPLPIHLICDNVRTPGNLGGILRAAAGVGCEKVLLTKGCVDL
WDPKVVRSGAGAHFRQPIISSIEWEELPNNLAEKTTIFIADSNVKLMNDDFESENALDCN
IPVVPYYSVDFGILKHITLIIGGETEGISENSYRLAANRNGLRLNIPLQKGVDSLNTGMA
TAVIAFEMRKQLIQAQAKAQLDKIGMKVV