New model in OGS2.0 | DPOGS208144  |
---|---|
Genomic Position | scaffold1704:+ 8281-21931 |
See gene structure | |
CDS Length | 1140 |
Paired RNAseq reads   | 87 |
Single RNAseq reads   | 245 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012552 (1e-99) |
Best Drosophila hit   | CG31646 (4e-93) |
Best Human hit | neurotrimin isoform 3 (2e-28) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC000863 [Tribolium castaneum] (2e-112) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC000863 [Tribolium castaneum] (2e-110) |
GeneOntology terms    | GO:0005886 plasma membrane GO:0007155 cell adhesion |
InterPro families    | IPR013098 Immunoglobulin I-set IPR013106 Immunoglobulin V-set IPR007110 Immunoglobulin-like IPR003599 Immunoglobulin subtype IPR003598 Immunoglobulin subtype 2 IPR013783 Immunoglobulin-like fold |
Orthology group | MCL16936 |
Nucleotide sequence:
ATGATATTAACTTTTATCATGTTGGATTGTCTTCTAGCTCGGAATATAGACGCAACTATA
CATGAGCCCGGTTTTAGTGGTCCGATAGAAAACGTGACAGCACCTCTGGGTCGGGAAGCG
ATACTCGCGTGCACAGTTCATAACCTCTCCACATACAAGGTTGCGTGGCTAAGAGTGGAC
ACCCAGACAATCTTAACGATACATACCCATGTGATATCAAGGAGTAGACGTGTAGGGGTC
ACTCATAGTGATCAAAGGACCTGGTTCCTTCATATACGCGAGCTGAGAGAAACAGACAGA
GGATGGTATATGTGTCAAATAAATACAGATCCCATGAAGAGTCAGCTGGGATACTTGGAT
ATAGTCGTTCCACCGGATATTCTCGACCGCGGAACAAGCGCTGATCAGACGGTACGCGAA
GGGGCGTCGATAAGTCTAACATGTGCTGCGACTGGGTCACCACATCCTCAGATCACGTGG
CGAAGGGAGCATTCCAAACCCATTGTGGGTTCAGACGGGTTACAAGTGACGTCATTGGAA
GGTCCTGTGTTAAATATAAGCCGAGTGACGCGCCAGCATGCCGGGGCGTACCTATGCATC
GCTTCAAACGGCGTACCGCCAACTGTTAGCAAGCGAATAATGCTTACCGTTGAATTTCCA
CCGGTGATCGTTATTAGAAATCAGCTAGTAGGAGCAGCCCTGGGTTCAGACCTCGTCATC
GAATGTGAGACCGAAGCATATCCGAAACCAGTCAGTTATTGGAGTCGAGAGAGCGGTGAA
ATCGTTCCTATTGGTGGGAGTTTAGAGCCTCAGAAGATATCCGGTTCCTATCGGTCAGTA
CTCAGACTACCAATACGAAGAGTTACCAGTGCAGATTACGGAACTTACAAGTGTGTCTCT
AAGAACTCGTTGGGCGATACCGAGGGTTCAATTAAGTTGTATCCAATGCAACCGCCGGCA
ATGGAAAACCGAAATGTCATCCAGAAGCTAAATATTGTGGCTGGGAAAGCTTCAGACATC
ACACCGTTTGGCACACAAGATTTCAGATTACAAGATTACAACAAAGGGGTTTTGAAGGAT
CGTTTTTGTTACCGCATTATGATCACGTTCATTATCGTAATAAAAGTTGTGTTAATTTAA
Protein sequence:
MILTFIMLDCLLARNIDATIHEPGFSGPIENVTAPLGREAILACTVHNLSTYKVAWLRVD
TQTILTIHTHVISRSRRVGVTHSDQRTWFLHIRELRETDRGWYMCQINTDPMKSQLGYLD
IVVPPDILDRGTSADQTVREGASISLTCAATGSPHPQITWRREHSKPIVGSDGLQVTSLE
GPVLNISRVTRQHAGAYLCIASNGVPPTVSKRIMLTVEFPPVIVIRNQLVGAALGSDLVI
ECETEAYPKPVSYWSRESGEIVPIGGSLEPQKISGSYRSVLRLPIRRVTSADYGTYKCVS
KNSLGDTEGSIKLYPMQPPAMENRNVIQKLNIVAGKASDITPFGTQDFRLQDYNKGVLKD
RFCYRIMITFIIVIKVVLI