| New model in OGS2.0 | DPOGS211390 |
|---|---|
| Genomic Position | scaffold4822:- 5760-6743 |
| See gene structure | |
| CDS Length | 984 |
| Paired RNAseq reads | 168 |
| Single RNAseq reads | 454 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012527 (9e-51) |
| Best Drosophila hit | CG7675, isoform B (7e-44) |
| Best Human hit | retinol dehydrogenase 11 (1e-38) |
| Best NR hit (blastp) | PREDICTED: similar to LOC407663 protein [Tribolium castaneum] (4e-61) |
| Best NR hit (blastx) | PREDICTED: similar to LOC407663 protein [Tribolium castaneum] (4e-61) |
| GeneOntology terms | GO:0016614 oxidoreductase activity, acting on CH-OH group of donors GO:0005488 binding GO:0055114 oxidation reduction |
| InterPro families | IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR IPR016040 NAD(P)-binding domain |
| Orthology group | MCL13089 |
Nucleotide sequence:
ATGATTGTGTTGTTCATCATTCTTGTCATCGTAATAGCTATCCTGGGTATTGGGATTTAT
CAGAAAAATACTAATAATATATGCAGATCGAAGAAGAGGCTTGATGGGAAAACAGCTCTT
GTGACTGGTGGAACTTCCGGAATGGGACTCCGGATAGCAATGGACTTCGCCGATAGAGGA
GCGCGGGTGATCATCGCCTGTCCCTTCGTGGAGGAAGGGATGTGGGCCAGAAGAAAGATA
GTCGAGAAAACGGAAAACGATAACGTCGTCTTCAAACTATTAGATCTGTCATCTTGTAAG
CTGGTCCGGAAATTCGCTGAGGAAATAAATCAAAACGAAGAGAGGCTGGACATCTTAATA
AACAATGCTGGCATTGGATCAATGAACGAAAGGTTGACCAAGGATGGAATGAACTGCACC
ATGCAAGTTAACTACTACTGTCAGTTCATGTTGACTTTGTTGTTGATACCCTTGATGAAG
AGGACCGCGACAGCATCAGAGCCCGCCAGGGTCATTAACACCTCCTCAGTCTTACACCAC
TTTGGTTCGACCAATTTCGAAATGTTGAATGCTTTAAACTATTGGTATTTTTTACAAGTT
TACGCTAACAGTAAACTGTGCGTCGCGATGTTTACACGTGAATTATCGAAGAGATTAAAA
GGCTCGAATATCTCTGTGAACGTGGTGGATCCGGGTGCCGTGGGCACGCCTATATTTCAA
GATTTAGGCAAATATTACGGAGCCATAACAACGTTTTTGTTCATATCCCTGTTCAAGACT
CCGTTTCAGGGCGCTCAGACAGCTATCCACGTGGCATTAGACAAGAGAGCTGGCCAAGTG
AGTGGCGAATTTTTCAAGAACTGCAAACTATCCCAGGCTAATGCCACGGCTCGCTGTGAA
GTACTGGCTAAAGAACTATGGAAACACACCCAGAACCTAGTGGATATGAGTGACGAGGAA
ATAGATAGTTGTTTACATTCATGA
Protein sequence:
MIVLFIILVIVIAILGIGIYQKNTNNICRSKKRLDGKTALVTGGTSGMGLRIAMDFADRG
ARVIIACPFVEEGMWARRKIVEKTENDNVVFKLLDLSSCKLVRKFAEEINQNEERLDILI
NNAGIGSMNERLTKDGMNCTMQVNYYCQFMLTLLLIPLMKRTATASEPARVINTSSVLHH
FGSTNFEMLNALNYWYFLQVYANSKLCVAMFTRELSKRLKGSNISVNVVDPGAVGTPIFQ
DLGKYYGAITTFLFISLFKTPFQGAQTAIHVALDKRAGQVSGEFFKNCKLSQANATARCE
VLAKELWKHTQNLVDMSDEEIDSCLHS