| New model in OGS2.0 | DPOGS209342 |
|---|---|
| Genomic Position | scaffold11908:- 129-1582 |
| See gene structure | |
| CDS Length | 570 |
| Paired RNAseq reads | 0 |
| Single RNAseq reads | 3 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008012 (1e-09) |
| Best Drosophila hit | ND |
| Best Human hit | jerky protein homolog isoform a (2e-18) |
| Best NR hit (blastp) | PREDICTED: similar to jerky homolog-like [Ornithorhynchus anatinus] (1e-21) |
| Best NR hit (blastx) | PREDICTED: similar to jerky homolog-like [Ornithorhynchus anatinus] (1e-21) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0005634 nucleus GO:0030529 ribonucleoprotein complex GO:0005840 ribosome GO:0003677 DNA binding GO:0003729 mRNA binding GO:0045449 regulation of transcription GO:0000775 chromosome, centromeric region GO:0003676 nucleic acid binding |
| InterPro families | IPR006695 Centromere protein Cenp-B, DNA-binding domain 1 IPR004906 Pogo transposase / Cenp-B / PDC2, subgroup, DNA-binding HTH domain IPR011526 Helix-turn-helix, Psq-like IPR009057 Homeodomain-like IPR012287 Homeodomain-related |
| Orthology group | MCL13163 |
Nucleotide sequence:
ATGTCTAAGCGTAAAAGAGTAGTGTTGTCTCTTGGAGACAAAATGAAGATAATCGAGGGT
ATAAAAAATGGTGAATCTGGCAGTAAGTTGGCGCAAATATATGGTGTAGGAGTATCTACG
ATATCAGACATTAAAAAAAATTCTGCTTCTTTAATGAAATTTACTTATGCTCTTGAGAAA
GAAGATGGCAGCTCGCAACGTAAAGTCATGAAAAAACCTAAGAATGAAATTCTAGAAAAC
GCAGTTTTCACTTGGTTTTTGCAAAAGCGTGCATGCGGCCAGCGAATATCTGGACCTCTG
TTATGTGAAAAAGCATTGGATTTTAATAAATGCTTGGTGGTGATACTTCTTTCAAAGCGA
GCTGTGGATGTAGAAGTGTGGAACGCGGTGGAATCGCAAACACTGAAACGGGCATGGAAT
AAATTATTAAAATTAAGTCCTTCTGCTAATCCTGTCATGAATCCGCAAGAAGATTATTTT
GAAGAAATTACAGAAGCGGTGAAAATTCTTAGCATTGGTGAAGTATGCGATGAAGAAAAT
ATCAAAGAGTGGCTGGACTGCGATAGTTAA
Protein sequence:
MSKRKRVVLSLGDKMKIIEGIKNGESGSKLAQIYGVGVSTISDIKKNSASLMKFTYALEK
EDGSSQRKVMKKPKNEILENAVFTWFLQKRACGQRISGPLLCEKALDFNKCLVVILLSKR
AVDVEVWNAVESQTLKRAWNKLLKLSPSANPVMNPQEDYFEEITEAVKILSIGEVCDEEN
IKEWLDCDS